RNA–Protein interactions for RNA: ENST00000579954.1

SSH2-209, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 3 BASIC

Gene SSH2, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-209ENST00000579954 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.66□□□□□ -1.02
SSH2-209ENST00000579954 APOBEC4Q8WW27 367 aaKnown RBP8.66□□□□□ -1.02
SSH2-209ENST00000579954 SLC5A11Q8WWX8 675 aa8.66□□□□□ -1.02
SSH2-209ENST00000579954 MMABQ96EY8 250 aaPredicted RBP8.66□□□□□ -1.02
SSH2-209ENST00000579954 MACROD1Q9BQ69 325 aa8.66□□□□□ -1.02
SSH2-209ENST00000579954 DHRS4Q9BTZ2 278 aa8.66□□□□□ -1.02
SSH2-209ENST00000579954 SGPP1Q9BX95 441 aa8.66□□□□□ -1.02
SSH2-209ENST00000579954 FAM117AQ9C073 453 aa8.66□□□□□ -1.02
SSH2-209ENST00000579954 SEMA4CQ9C0C4 833 aa8.66□□□□□ -1.02
SSH2-209ENST00000579954 VPS11Q9H270 941 aa8.66□□□□□ -1.02
SSH2-209ENST00000579954 SOX17Q9H6I2 414 aaPredicted RBP8.66□□□□□ -1.02
SSH2-209ENST00000579954 ACSS3Q9H6R3 686 aa8.66□□□□□ -1.02
SSH2-209ENST00000579954 ALG9Q9H6U8 611 aa8.66□□□□□ -1.02
SSH2-209ENST00000579954 ZNF304Q9HCX3 659 aa8.66□□□□□ -1.02
SSH2-209ENST00000579954 SNX15Q9NRS6 342 aa8.66□□□□□ -1.02
SSH2-209ENST00000579954 CTSFQ9UBX1 484 aa8.66□□□□□ -1.02
SSH2-209ENST00000579954 KLK4Q9Y5K2 254 aa8.66□□□□□ -1.02
SSH2-209ENST00000579954 HEMK1Q9Y5R4 338 aaPredicted RBP8.66□□□□□ -1.02
SSH2-209ENST00000579954 A0A087X1B8 175 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 A0A0A6YYC8 382 aaPredicted RBP8.65□□□□□ -1.02
SSH2-209ENST00000579954 EXOC1LA0A1B0GW35 172 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 A6NL46 340 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 I3L1I5 382 aaPredicted RBP8.65□□□□□ -1.02
SSH2-209ENST00000579954 TK2O00142 265 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 PEX12O00623 359 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 PRPF4O43172 522 aaKnown RBP eCLIP8.65□□□□□ -1.02
SSH2-209ENST00000579954 NDUFS4O43181 175 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 CCNT2O60583 730 aaKnown RBP8.65□□□□□ -1.02
SSH2-209ENST00000579954 RFPL1O75677 317 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 DNAJB5O75953 348 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 MED26O95402 600 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 CD63P08962 238 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 SLC35G6P0C7Q6 338 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 SLC35E2BP0CK96 405 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 NPPBP16860 134 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 TFEBP19484 476 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 CRABP2P29373 138 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 TYK2P29597 1187 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 ECHS1P30084 290 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 BCL6P41182 706 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 GDF5P43026 501 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 MSH2P43246 934 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 GLRBP48167 497 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 HNMTP50135 292 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 PMS2P54278 862 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 CSNK1G2P78368 415 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 C19orf57Q0VDD7 668 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 RBBP5Q15291 538 aaKnown RBP8.65□□□□□ -1.02
SSH2-209ENST00000579954 TGFBIQ15582 683 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 OR4D1Q15615 310 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 PPP1R3AQ16821 1122 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 CRTC2Q53ET0 693 aaPredicted RBP8.65□□□□□ -1.02
SSH2-209ENST00000579954 FBXO48Q5FWF7 155 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 CATSPEREQ5SY80 951 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 MFSD4BQ5TF39 518 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 ZNF385CQ66K41 422 aaPredicted RBP8.65□□□□□ -1.02
SSH2-209ENST00000579954 CPZQ66K79 652 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 KLC3Q6P597 504 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 PCSK4Q6UW60 755 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 ZNF517Q6ZMY9 492 aaPredicted RBP8.65□□□□□ -1.02
SSH2-209ENST00000579954 PRICKLE2Q7Z3G6 844 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 ASPGQ86U10 573 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 TCAIMQ8N3R3 496 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 EXD3Q8N9H8 876 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 CAMKVQ8NCB2 501 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 LSM14AQ8ND56 463 aaKnown RBP8.65□□□□□ -1.02
SSH2-209ENST00000579954 C9orf43Q8TAL5 461 aaPredicted RBP8.65□□□□□ -1.02
SSH2-209ENST00000579954 KCTD4Q8WVF5 259 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 THAP4Q8WY91 577 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 CCT6BQ92526 530 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 ANKRD7Q92527 254 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 NEIL2Q969S2 332 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 MIEF2Q96C03 454 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 WBP1Q96G27 269 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 SCYL1Q96KG9 808 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 C10orf90Q96M02 699 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 OR2A5Q96R48 311 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 OR4K3Q96R72 315 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 PAFAH2Q99487 392 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 AIF1LQ9BQI0 150 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 MCMBPQ9BTE3 642 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 DRC3Q9H069 523 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 CNOT10Q9H9A5 744 aaKnown RBP8.65□□□□□ -1.02
SSH2-209ENST00000579954 NMRAL1Q9HBL8 299 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 ZNF71Q9NQZ8 489 aaPredicted RBP8.65□□□□□ -1.02
SSH2-209ENST00000579954 TRPC4Q9UBN4 977 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 ZNF282Q9UDV7 671 aaPredicted RBP8.65□□□□□ -1.02
SSH2-209ENST00000579954 G3BP2Q9UN86 482 aaKnown RBP8.65□□□□□ -1.02
SSH2-209ENST00000579954 CDC14AQ9UNH5 594 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 SLC22A14Q9Y267 594 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 ACOT9Q9Y305 439 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 KCNMB2Q9Y691 235 aa8.65□□□□□ -1.02
SSH2-209ENST00000579954 A0A096LPK6 155 aa8.64□□□□□ -1.03
SSH2-209ENST00000579954 FITM1A5D6W6 292 aa8.64□□□□□ -1.03
SSH2-209ENST00000579954 MKRN2OSH3BPM6 223 aa8.64□□□□□ -1.03
SSH2-209ENST00000579954 UBXN8O00124 270 aa8.64□□□□□ -1.03
SSH2-209ENST00000579954 H2AFYO75367 372 aaKnown RBP8.64□□□□□ -1.03
SSH2-209ENST00000579954 C1QAP02745 245 aa8.64□□□□□ -1.03
SSH2-209ENST00000579954 CAPN1P07384 714 aa8.64□□□□□ -1.03
SSH2-209ENST00000579954 ARL1P40616 181 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms