RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 FAM86B1Q8N7N1 296 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 FBXO30Q8TB52 745 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 SETD7Q8WTS6 366 aaKnown RBP17.48■□□□□ 0.39
SMPD3-211ENST00000568373 TFGQ92734 400 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-211ENST00000568373 FAM162AQ96A26 154 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 REXO5Q96IC2 774 aaKnown RBP17.48■□□□□ 0.39
SMPD3-211ENST00000568373 PANX1Q96RD7 426 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 CARS2Q9HA77 564 aaKnown RBP17.48■□□□□ 0.39
SMPD3-211ENST00000568373 MBNL1Q9NR56 388 aaKnown RBP17.48■□□□□ 0.39
SMPD3-211ENST00000568373 ZNF639Q9UID6 485 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 MAPRE3Q9UPY8 281 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 DNMT3AQ9Y6K1 912 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-211ENST00000568373 ATG2BQ96BY7 2078 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 K7EQS6 105 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 EI24O14681 340 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 FPGTO14772 594 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 MAP3K13O43283 966 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 DEAF1O75398 565 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-211ENST00000568373 TIA1P31483 386 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMPD3-211ENST00000568373 TIE1P35590 1138 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 SEC13P55735 322 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 HIST2H2ACQ16777 129 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-211ENST00000568373 THEMIS2Q5TEJ8 643 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 METRNLQ641Q3 311 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 HIST2H2AA3Q6FI13 130 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 GALNT18Q6P9A2 607 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 IYDQ6PHW0 289 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 ENPP6Q6UWR7 440 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 GPR156Q8NFN8 814 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 VPS50Q96JG6 964 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 IL17FQ96PD4 163 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 S1PR5Q9H228 398 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 WDR26Q9H7D7 661 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 DMRT3Q9NQL9 472 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 TM7SF3Q9NS93 570 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 CLEC1BQ9P126 229 aa17.48■□□□□ 0.39
SMPD3-211ENST00000568373 CREG1O75629 220 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 PRSS23O95084 383 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 LAMP1P11279 417 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 TEAD1P28347 426 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 LAPTM5Q13571 262 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 IRF4Q15306 451 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 LIN52Q52LA3 116 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 PRAMEF14Q5SWL7 426 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 PRAMEF13Q5VWM6 474 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 ZNF776Q68DI1 518 aaPredicted RBP17.47■□□□□ 0.39
SMPD3-211ENST00000568373 CAMKMTQ7Z624 323 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 EZH1Q92800 747 aaPredicted RBP17.47■□□□□ 0.39
SMPD3-211ENST00000568373 NCLNQ969V3 563 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 NTN4Q9HB63 628 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 DCAF13Q9NV06 445 aaKnown RBP17.47■□□□□ 0.39
SMPD3-211ENST00000568373 PLAGL1Q9UM63 463 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 ZFR2Q9UPR6 939 aaKnown RBP17.47■□□□□ 0.39
SMPD3-211ENST00000568373 OR1A2Q9Y585 309 aa17.47■□□□□ 0.39
SMPD3-211ENST00000568373 EVPLLA8MZ36 301 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 GPR89AB7ZAQ6 455 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 PCDH7O60245 1069 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 GPR89BP0CG08 455 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 MYCLP1P12525 358 aaPredicted RBP17.46■□□□□ 0.39
SMPD3-211ENST00000568373 ZNF23P17027 643 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 TRIM23P36406 574 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 SLC14A1Q13336 389 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 FGL2Q14314 439 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 HKDC1Q2TB90 917 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 ANKRD26P1Q6NSI1 321 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 LCTLQ6UWM7 567 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 SERPINA11Q86U17 422 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 OR5K2Q8NHB8 316 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 PRPF18Q99633 342 aaKnown RBP17.46■□□□□ 0.39
SMPD3-211ENST00000568373 DUSP26Q9BV47 211 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 ADI1Q9BV57 179 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 SPNS1Q9H2V7 528 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 SIRT5Q9NXA8 310 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 BTBD3Q9Y2F9 522 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 TDRKHQ9Y2W6 561 aaKnown RBP17.46■□□□□ 0.39
SMPD3-211ENST00000568373 SPTBN5Q9NRC6 3674 aaKnown RBP17.46■□□□□ 0.39
SMPD3-211ENST00000568373 GNG14A0A1W2PPG7 69 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 GABRR3A8MPY1 467 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 KMOO15229 486 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 YY2O15391 372 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 EPN2O95208 641 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 RPN2P04844 631 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 ERGP11308 486 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 HPCAL1P37235 193 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 MERTKQ12866 999 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 ADAM15Q13444 863 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 PON2Q15165 354 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 NKG7Q16617 165 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 CPTPQ5TA50 214 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 KRT80Q6KB66 452 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 ZNF551Q7Z340 670 aaPredicted RBP17.46■□□□□ 0.39
SMPD3-211ENST00000568373 CLECL1Q8IZS7 167 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 SLC47A1Q96FL8 570 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 HAUS8Q9BT25 410 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 YIPF3Q9GZM5 350 aa17.46■□□□□ 0.39
SMPD3-211ENST00000568373 TICRRQ7Z2Z1 1910 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 KLHL33A6NCF5 533 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 CLIC1O00299 241 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 UPK1AO00322 258 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 PRKD3O94806 890 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms