RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ADAMTS17Q8TE56 1095 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 SLC44A1Q8WWI5 657 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 SLC5A11Q8WWX8 675 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 EXT2Q93063 718 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 NEIL2Q969S2 332 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 FKBP10Q96AY3 582 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 PAFAH2Q99487 392 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 SEMA4CQ9C0C4 833 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 SNX15Q9NRS6 342 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 SLC22A11Q9NSA0 550 aa12.31□□□□□ -0.44
COL5A1-206ENST00000465877 A0A087WUV0 522 aaPredicted RBP12.3□□□□□ -0.44
COL5A1-206ENST00000465877 HMX2A2RU54 273 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 EIF4E1BA6NMX2 242 aaKnown RBP12.3□□□□□ -0.44
COL5A1-206ENST00000465877 KLF7O75840 302 aaPredicted RBP12.3□□□□□ -0.44
COL5A1-206ENST00000465877 WDR47O94967 919 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 STATHP02808 62 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 PRB1P04280 392 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 ABHD2P08910 425 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 CRABP2P29373 138 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 GRK3P35626 688 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 BCL6P41182 706 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 FOLR3P41439 243 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 CCR10P46092 362 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 SLC6A12P48065 614 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 CSRP3P50461 194 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 EMP3P54852 163 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 IRF9Q00978 393 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 DLG1Q12959 904 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 FAM214AQ32MH5 1076 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 TAOK1Q7L7X3 1001 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 CCDC91Q7Z6B0 441 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 THOC6Q86W42 341 aaKnown RBP12.3□□□□□ -0.44
COL5A1-206ENST00000465877 KLHDC8AQ8IYD2 350 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 CENPLQ8N0S6 344 aaPredicted RBP12.3□□□□□ -0.44
COL5A1-206ENST00000465877 TCAIMQ8N3R3 496 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 PDPRQ8NCN5 879 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.3□□□□□ -0.44
COL5A1-206ENST00000465877 RHBDF1Q96CC6 855 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 TMEM79Q9BSE2 394 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 WWOXQ9NZC7 414 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 CTSFQ9UBX1 484 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 PTRH2Q9Y3E5 179 aaKnown RBP12.3□□□□□ -0.44
COL5A1-206ENST00000465877 DYRK1BQ9Y463 629 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 KCNMB2Q9Y691 235 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 SCN3AQ9NY46 2000 aa12.3□□□□□ -0.44
COL5A1-206ENST00000465877 MED13Q9UHV7 2174 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 A0A087X1B8 175 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 EXOC1LA0A1B0GW35 172 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 FEZF1A0PJY2 475 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 TXNDC9O14530 226 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 KERAO60938 352 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 C1QL1O75973 258 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 IPO13O94829 963 aaKnown RBP12.29□□□□□ -0.44
COL5A1-206ENST00000465877 ONECUT2O95948 504 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 ALDOAP04075 364 aaKnown RBP12.29□□□□□ -0.44
COL5A1-206ENST00000465877 LTA4HP09960 611 aaKnown RBP12.29□□□□□ -0.44
COL5A1-206ENST00000465877 MYBL2P10244 700 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 TFEBP19484 476 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 FBLP22087 321 aaKnown RBP12.29□□□□□ -0.44
COL5A1-206ENST00000465877 OR1D4P47884 311 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 CCR8P51685 355 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 PMS2P54278 862 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 FOXL2P58012 376 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 REEP5Q00765 189 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 MEF2AQ02078 507 aaPredicted RBP12.29□□□□□ -0.44
COL5A1-206ENST00000465877 KCNAB2Q13303 367 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 C18orf21Q32NC0 220 aaPredicted RBP12.29□□□□□ -0.44
COL5A1-206ENST00000465877 CATSPEREQ5SY80 951 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 GARNL3Q5VVW2 1013 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 CPZQ66K79 652 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 PRMT9Q6P2P2 845 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 GPSM1Q86YR5 675 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 RAB43Q86YS6 212 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 ARHGEF39Q8N4T4 335 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 EXD3Q8N9H8 876 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 ABHD11Q8NFV4 315 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 OR2Y1Q8NGV0 311 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 UHMK1Q8TAS1 419 aaKnown RBP12.29□□□□□ -0.44
COL5A1-206ENST00000465877 KCTD4Q8WVF5 259 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 THAP4Q8WY91 577 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 ISL2Q96A47 359 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 KIAA1191Q96A73 305 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 MVB12AQ96EY5 273 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 SPSB2Q99619 263 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 DRC3Q9H069 523 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 SLC26A1Q9H2B4 701 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 ADNPQ9H2P0 1102 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 SPNS1Q9H2V7 528 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 ALG9Q9H6U8 611 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 WDR54Q9H977 334 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 PELI2Q9HAT8 420 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 NMRAL1Q9HBL8 299 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 IGSF5Q9NSI5 407 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 NUDT4Q9NZJ9 180 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 RNF112Q9ULX5 631 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 SLC22A14Q9Y267 594 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 IKBKGQ9Y6K9 419 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 MAU2Q9Y6X3 613 aa12.29□□□□□ -0.44
COL5A1-206ENST00000465877 KCNE1BA0A087WTH5 132 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 A0A096LPK6 155 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms