RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SLCO4C1Q6ZQN7 724 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 TMEM26Q6ZUK4 368 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 USP51Q70EK9 711 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 LPCAT2Q7L5N7 544 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 SERPINA11Q86U17 422 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 HIPK1Q86Z02 1210 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 MMAAQ8IVH4 418 aaKnown RBP10.07□□□□□ -0.8
CPNE1-218ENST00000439806 ZDHHC21Q8IVQ6 265 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 ZZZ3Q8IYH5 903 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 C8orf59Q8N0T1 100 aaPredicted RBP10.07□□□□□ -0.8
CPNE1-218ENST00000439806 TERB1Q8NA31 727 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 OR7G3Q8NG95 312 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 OR8J2Q8NGG1 315 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 HUS1BQ8NHY5 278 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 CHTF18Q8WVB6 975 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 NEIL2Q969S2 332 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 HIC2Q96JB3 615 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 RBM4BQ9BQ04 359 aaKnown RBP10.07□□□□□ -0.8
CPNE1-218ENST00000439806 RBM4Q9BWF3 364 aaKnown RBP10.07□□□□□ -0.8
CPNE1-218ENST00000439806 SPATA9Q9BWV2 254 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 OSBPL10Q9BXB5 764 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 ASPSCR1Q9BZE9 553 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 ING2Q9H160 280 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 SOX17Q9H6I2 414 aaPredicted RBP10.07□□□□□ -0.8
CPNE1-218ENST00000439806 CCDC177Q9NQR7 707 aaPredicted RBP10.07□□□□□ -0.8
CPNE1-218ENST00000439806 OBP2AQ9NY56 170 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 IFT80Q9P2H3 777 aaPredicted RBP10.07□□□□□ -0.8
CPNE1-218ENST00000439806 BTNL2Q9UIR0 455 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 BAG5Q9UL15 447 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 VPS4AQ9UN37 437 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 CEPT1Q9Y6K0 416 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 TBC1D3BA6NDS4 549 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 TRIM64CA6NLI5 447 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 K7ESM1 405 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 PAPLNO95428 1278 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 ETHE1O95571 254 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 ALPLP05186 524 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 EPHX1P07099 455 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 CA3P07451 260 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 LAMP1P11279 417 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 ZNF8P17098 575 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-218ENST00000439806 GPX2P18283 190 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 SHMT2P34897 504 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 RPL3P39023 403 aaKnown RBP10.06□□□□□ -0.8
CPNE1-218ENST00000439806 CDK9P50750 372 aaKnown RBP10.06□□□□□ -0.8
CPNE1-218ENST00000439806 RAD23AP54725 363 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 RAE1P78406 368 aaKnown RBP10.06□□□□□ -0.8
CPNE1-218ENST00000439806 MESP2Q0VG99 397 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 SLC14A1Q13336 389 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 NFE2L1Q14494 772 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 PLCL1Q15111 1095 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 SF1Q15637 639 aaKnown RBP10.06□□□□□ -0.8
CPNE1-218ENST00000439806 DUSP6Q16828 381 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 VMACQ2NL98 169 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 RFX4Q33E94 735 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 PRAMEF14Q5SWL7 426 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 CATSPEREQ5SY80 951 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 PRAMEF13Q5VWM6 474 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 FAM46CQ5VWP2 391 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 ANKRD26P1Q6NSI1 321 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 R3HCC1LQ7Z5L2 792 aaKnown RBP10.06□□□□□ -0.8
CPNE1-218ENST00000439806 YAF2Q8IY57 180 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 ALDH16A1Q8IZ83 802 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 CLECL1Q8IZS7 167 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 C10orf111Q8N326 155 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 OR4A15Q8NGL6 344 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 OR2L2Q8NH16 312 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 SETD7Q8WTS6 366 aaKnown RBP10.06□□□□□ -0.8
CPNE1-218ENST00000439806 SLC5A11Q8WWX8 675 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 FGF13Q92913 245 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 UBE2E3Q969T4 207 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 RAB7BQ96AH8 199 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 SH3KBP1Q96B97 665 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 TMIGD2Q96BF3 282 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 CXorf40BQ96DE9 158 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 WDR34Q96EX3 536 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 LINC00615Q96LM1 132 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-218ENST00000439806 FAM129BQ96TA1 746 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 SGPP1Q9BX95 441 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 TMEM245Q9H330 911 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 TOR3AQ9H497 397 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 DPEP2Q9H4A9 486 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 SMURF2Q9HAU4 748 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 DMRT3Q9NQL9 472 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 AASDHPPTQ9NRN7 309 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 SH3BP4Q9P0V3 963 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 UTS2RQ9UKP6 389 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 GPR34Q9UPC5 381 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 PCDHB11Q9Y5F2 797 aa10.06□□□□□ -0.8
CPNE1-218ENST00000439806 PIPSLA2A3N6 862 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 TRIM64A6NGJ6 449 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 GABRR3A8MPY1 467 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 GRXCR1A8MXD5 290 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 FOXE1O00358 373 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 PI15O43692 258 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 NOBOXO60393 691 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 NOL3O60936 208 aaKnown RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 PCCBP05166 539 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 FABP3P05413 133 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 EFNA1P20827 205 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms