RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 MYO1HQ8N1T3 1032 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 MMABQ96EY8 250 aaPredicted RBP16.86■□□□□ 0.29
HDDC3-201ENST00000330334 SGPP1Q9BX95 441 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 ADAMTS6Q9UKP5 1117 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 VWA7Q9Y334 891 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 PCDHGA10Q9Y5H3 936 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 SAR1BQ9Y6B6 198 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 TEX264Q9Y6I9 313 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 SPTBN1Q01082 2364 aaKnown RBP16.85■□□□□ 0.29
HDDC3-201ENST00000330334 H0YIG0 161 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 CCDC188H7C350 402 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 MAP2K7O14733 419 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 BANF1O75531 89 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 CBX6O95503 412 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 TSPAN12O95859 305 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 HIST1H2AGP0C0S8 130 aaPredicted RBP16.85■□□□□ 0.29
HDDC3-201ENST00000330334 HIST1H2ADP20671 130 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 ELK3P41970 407 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 IL2P60568 153 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 TBPL1P62380 186 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 DR1Q01658 176 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 Q0VFX4 171 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 RBM20Q5T481 1227 aaKnown RBP16.85■□□□□ 0.29
HDDC3-201ENST00000330334 HIBCHQ6NVY1 386 aaPredicted RBP16.85■□□□□ 0.29
HDDC3-201ENST00000330334 AGTRAPQ6RW13 159 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 CUZD1Q86UP6 607 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 CISD2Q8N5K1 135 aaKnown RBP16.85■□□□□ 0.29
HDDC3-201ENST00000330334 TM4SF19Q96DZ7 209 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 C19orf60Q96EN9 201 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 PDLIM5Q96HC4 596 aaKnown RBP16.85■□□□□ 0.29
HDDC3-201ENST00000330334 THOC3Q96J01 351 aaKnown RBP16.85■□□□□ 0.29
HDDC3-201ENST00000330334 HIST1H2AHQ96KK5 128 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 HIST1H2AJQ99878 128 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 H2AFJQ9BTM1 129 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 RNF14Q9UBS8 474 aa16.85■□□□□ 0.29
HDDC3-201ENST00000330334 COPG1Q9Y678 874 aaKnown RBP16.85■□□□□ 0.29
HDDC3-201ENST00000330334 NUP210LQ5VU65 1888 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 LOC102723996A0A087X1L8 192 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 USP27XA6NNY8 438 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 CYSRT1A8MQ03 144 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 P2RX6O15547 441 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 ALOX12BO75342 701 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 CXCR2P25025 360 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 AVPR1BP47901 424 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 AP1S2P56377 157 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 GNG11P61952 73 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 CSNK1G2P78368 415 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 HIF1AQ16665 826 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 B3GNTL1Q67FW5 361 aaPredicted RBP16.84■□□□□ 0.29
HDDC3-201ENST00000330334 LCTLQ6UWM7 567 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 ISLR2Q6UXK2 745 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 RIPOR1Q6ZS17 1223 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 VN1R4Q7Z5H5 301 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 C17orf64Q86WR6 236 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 KBTBD2Q8IY47 623 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 PRSS58Q8IYP2 241 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 LINGO1Q96FE5 620 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 HAUS8Q9BT25 410 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 SARGQ9BW04 601 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 EPS8L2Q9H6S3 715 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 PPANQ9NQ55 473 aaKnown RBP16.84■□□□□ 0.29
HDDC3-201ENST00000330334 ABCF3Q9NUQ8 709 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 ASF1BQ9NVP2 202 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 DOCK10Q96BY6 2186 aa16.84■□□□□ 0.29
HDDC3-201ENST00000330334 A0A0A6YYC8 382 aaPredicted RBP16.83■□□□□ 0.28
HDDC3-201ENST00000330334 NSG1A0A0A6YYJ2 146 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 I3L1I5 382 aaPredicted RBP16.83■□□□□ 0.28
HDDC3-201ENST00000330334 TP73O15350 636 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 UTP20O75691 2785 aaKnown RBP16.83■□□□□ 0.28
HDDC3-201ENST00000330334 SEC31AO94979 1220 aaKnown RBP16.83■□□□□ 0.28
HDDC3-201ENST00000330334 AGFG2O95081 481 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 BMP10O95393 424 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 NSA2O95478 260 aaKnown RBP16.83■□□□□ 0.28
HDDC3-201ENST00000330334 SERPINA7P05543 415 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 HEXBP07686 556 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 COX6A1P12074 109 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 NPPBP16860 134 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 ARL4CP56559 192 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 AP2B1P63010 937 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 MFAP5Q13361 173 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 PDAP1Q13442 181 aaKnown RBP16.83■□□□□ 0.28
HDDC3-201ENST00000330334 NAE1Q13564 534 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 MDC1Q14676 2089 aaKnown RBP16.83■□□□□ 0.28
HDDC3-201ENST00000330334 TLR1Q15399 786 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 PHKG1Q16816 387 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 HECTD2Q5U5R9 776 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 DUPD1Q68J44 220 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 CAPN13Q6MZZ7 669 aaPredicted RBP16.83■□□□□ 0.28
HDDC3-201ENST00000330334 TMEM214Q6NUQ4 689 aaKnown RBP16.83■□□□□ 0.28
HDDC3-201ENST00000330334 TMEM205Q6UW68 189 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 PLD3Q8IV08 490 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 KLHL7Q8IXQ5 586 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 CAMKVQ8NCB2 501 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 ABHD11Q8NFV4 315 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 OR56A3Q8NH54 315 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 DNAJB14Q8TBM8 379 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 ANKRD7Q92527 254 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 PDLIM2Q96JY6 352 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 NAPGQ99747 312 aaPredicted RBP16.83■□□□□ 0.28
HDDC3-201ENST00000330334 MESP1Q9BRJ9 268 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms