RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ACPTQ9BZG2 426 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 UBA2Q9UBT2 640 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-205ENST00000539661 DLGAP4Q9Y2H0 992 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 CHD5Q8TDI0 1954 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 LOC730098B7Z3J9 87 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 CLIC1O00299 241 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 KIAA0513O60268 411 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 IGLV3-27P01718 113 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 DNTTP04053 509 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 ACPPP15309 386 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 PRPH2P23942 346 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 FAM209AQ5JX71 171 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 CERS6Q6ZMG9 384 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 ZNF605Q86T29 641 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 PSD4Q8NDX1 1056 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 C7orf34Q96L11 122 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 PHOX2BQ99453 314 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 RETREG1Q9H6L5 497 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 GPRC5BQ9NZH0 403 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 CDH23Q9H251 3354 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 ARHGAP33O14559 1287 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 PTHP01270 115 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 RGRP47804 291 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 MTAPQ13126 283 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 CCL14Q16627 93 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 DUOXA1Q1HG43 343 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 SOWAHCQ53LP3 525 aaPredicted RBP17.06■□□□□ 0.32
RAB40C-205ENST00000539661 GPR142Q7Z601 462 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 OR8H2Q8N162 312 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 MED30Q96HR3 178 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 C8orf48Q96LL4 319 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 KCNC2Q96PR1 638 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 TTPALQ9BTX7 342 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 SPATA9Q9BWV2 254 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 ASAH2Q9NR71 780 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 C14orf119Q9NWQ9 140 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 ADPRHL2Q9NX46 363 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 PPT2Q9UMR5 302 aa17.06■□□□□ 0.32
RAB40C-205ENST00000539661 ANKRD66B4E2M5 251 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 M0QZ92 97 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 CLDN9O95484 217 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 STSP08842 583 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 RPS3P23396 243 aaKnown RBP eCLIP17.05■□□□□ 0.32
RAB40C-205ENST00000539661 DGKAP23743 735 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 RACK1P63244 317 aaKnown RBP17.05■□□□□ 0.32
RAB40C-205ENST00000539661 MRPS6P82932 125 aaKnown RBP17.05■□□□□ 0.32
RAB40C-205ENST00000539661 NEK5Q6P3R8 708 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 KRT73Q86Y46 540 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 PTOV1Q86YD1 416 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 UROC1Q96N76 676 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 PRDM8Q9NQV8 689 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 ERVK13-1Q9NX77 482 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 FLRT1Q9NZU1 646 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 PADI2Q9Y2J8 665 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 TTC3P53804 2025 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 A0A0U1RQS6 177 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 EPN2O95208 641 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 YES1P07947 543 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 ENGP17813 658 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 PTX3P26022 381 aaPredicted RBP17.05■□□□□ 0.32
RAB40C-205ENST00000539661 HOXC8P31273 242 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 TNFSF8P32971 234 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 GDF5P43026 501 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 RING1Q06587 406 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 TBRG1Q3YBR2 411 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 PTRHD1Q6GMV3 140 aaKnown RBP17.05■□□□□ 0.32
RAB40C-205ENST00000539661 GPR155Q7Z3F1 870 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 RNF130Q86XS8 419 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 RAVER1Q8IY67 606 aaKnown RBP17.05■□□□□ 0.32
RAB40C-205ENST00000539661 HASPINQ8TF76 798 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 CDCA4Q9BXL8 241 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 RDH14Q9HBH5 336 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 BPIFA1Q9NP55 256 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 GPR83Q9NYM4 423 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 PCDHB5Q9Y5E4 795 aa17.05■□□□□ 0.32
RAB40C-205ENST00000539661 NPIPB8E9PQR5 432 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 CTDSP2O14595 271 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 GABRB1P18505 474 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 MZF1P28698 734 aaPredicted RBP17.04■□□□□ 0.32
RAB40C-205ENST00000539661 KIR3DL1P43629 444 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 BEX3Q00994 111 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 C19orf57Q0VDD7 668 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 ST3GAL4Q11206 333 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 GRB14Q14449 540 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 C5orf22Q49AR2 442 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 SLC39A12Q504Y0 691 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 GNASQ5JWF2 1037 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 ARMC4Q5T2S8 1044 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 ANGPTL6Q8NI99 470 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 RNF170Q96K19 258 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 TRNT1Q96Q11 434 aaKnown RBP17.04■□□□□ 0.32
RAB40C-205ENST00000539661 KATNAL1Q9BW62 490 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 SMURF1Q9HCE7 757 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 MARCH2Q9P0N8 246 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 CARD8Q9Y2G2 431 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 POFUT2Q9Y2G5 429 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 RAI2Q9Y5P3 530 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 ZNF7P17097 686 aaPredicted RBP17.04■□□□□ 0.32
RAB40C-205ENST00000539661 CTPS1P17812 591 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms