RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	RNF145	Q96MT1	663 aa		10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	CCDC115	Q96NT0	180 aa		10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	MTERF1	Q99551	399 aa	Known RBP	10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	SEPHS2	Q99611	448 aa		10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	CIB1	Q99828	191 aa		10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	BDH2	Q9BUT1	245 aa		10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	KCNH6	Q9H252	994 aa		10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	TRIT1	Q9H3H1	467 aa	Known RBP	10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	OSGEPL1	Q9H4B0	414 aa		10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	ACTL8	Q9H568	366 aa		10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	SLC52A3	Q9NQ40	469 aa		10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	FAM120C	Q9NX05	1096 aa	Known RBP	10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	MBD1	Q9UIS9	605 aa	Predicted RBP	10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	VPS13A	Q96RL7	3174 aa		10.42	□□□□□ -0.74
SPIDR-222	ENST00000524006	PLXND1	Q9Y4D7	1925 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	KRT87P	A6NCN2	255 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	IGLON5	A6NGN9	336 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	OTOL1	A6NHN0	477 aa	Predicted RBP	10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	NPIPB8	E9PQR5	432 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006		K7ESM1	405 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	GNGT2	O14610	69 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	FPGT	O14772	594 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	DENR	O43583	198 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	PI15	O43692	258 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	PCDH7	O60245	1069 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	SOD1	P00441	154 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	ANXA4	P09525	319 aa	Predicted RBP	10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	BMP2	P12643	396 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	ZNF23	P17027	643 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	GGT1	P19440	569 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	PPIB	P23284	216 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	CXCR2	P25025	360 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	PDHA2	P29803	388 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	TIE1	P35590	1138 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	TNFRSF4	P43489	277 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	OR4D2	P58180	307 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	CDK3	Q00526	305 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	ADAM15	Q13444	863 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	NFE2L1	Q14494	772 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	DUOXA1	Q1HG43	343 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	C6orf52	Q5T4I8	152 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	PIP5KL1	Q5T9C9	394 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	ANXA8L1	Q5VT79	327 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	KIAA1161	Q6NSJ0	714 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	PNCK	Q6P2M8	343 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	DLEU7	Q6UYE1	221 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	GCNT7	Q6ZNI0	430 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	FKBP9P1	Q75LS8	142 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	MARVELD2	Q8N4S9	558 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	LILRA3	Q8N6C8	439 aa	Predicted RBP	10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	TRPV3	Q8NET8	790 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	SLC5A11	Q8WWX8	675 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	SLCO4A1	Q96BD0	722 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	SLC47A1	Q96FL8	570 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	APIP	Q96GX9	242 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	MSLNL	Q96KJ4	702 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	TRAPPC9	Q96Q05	1148 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	PANX1	Q96RD7	426 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	MYADM	Q96S97	322 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	FAM192A	Q9GZU8	254 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	PCBD2	Q9H0N5	130 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	RSPH9	Q9H1X1	276 aa	Predicted RBP	10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	COQ10B	Q9H8M1	238 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	ZDHHC4	Q9NPG8	344 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	AGPAT4	Q9NRZ5	378 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	ATAD3A	Q9NVI7	634 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	CLEC1B	Q9P126	229 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	GMPR2	Q9P2T1	348 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	LIMD1	Q9UGP4	676 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	CD207	Q9UJ71	328 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	MOSPD1	Q9UJG1	213 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	DLGAP4	Q9Y2H0	992 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	TMEM98	Q9Y2Y6	226 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	FANCM	Q8IYD8	2048 aa		10.41	□□□□□ -0.74
SPIDR-222	ENST00000524006	HEATR5B	Q9P2D3	2071 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006		A0A1W2PP55	124 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	ARHGAP10	A1A4S6	786 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	PIPSL	A2A3N6	862 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	CXCR6	O00574	342 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	C1GALT1C1L	P0DN25	315 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	RAP2A	P10114	183 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	LAMP2	P13473	410 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	TIA1	P31483	386 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	TRPC1	P48995	793 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	RPS21	P63220	83 aa	Known RBP	10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	MESP2	Q0VG99	397 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	IRF4	Q15306	451 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	ATP6AP1	Q15904	470 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	INTS11	Q5TA45	600 aa	Known RBP	10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	CPTP	Q5TA50	214 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	ERICH5	Q6P6B1	374 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	TMEM184A	Q6ZMB5	413 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	R3HCC1L	Q7Z5L2	792 aa	Known RBP	10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	ANKRD46	Q86W74	232 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	C17orf64	Q86WR6	236 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	RASGRP3	Q8IV61	690 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	SFTPA1	Q8IWL2	248 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	C1orf52	Q8N6N3	182 aa	Known RBP	10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	PHC3	Q8NDX5	983 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	OR10A6	Q8NH74	314 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms