RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 PTBP2Q9UKA9 531 aaKnown RBP14.37□□□□□ -0.11
RNF4-210ENST00000508235 TMCO1Q9UM00 188 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 SLC22A14Q9Y267 594 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 H3BMH7 237 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 HCRTR1O43613 425 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 CDH16O75309 829 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 SHBGP04278 402 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 NUDT17P0C025 328 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 CDH1P12830 882 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 AGXTP21549 392 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 SLC6A12P48065 614 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 GLRBP48167 497 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 VSX2P58304 361 aaPredicted RBP14.36□□□□□ -0.11
RNF4-210ENST00000508235 ZXDCQ2QGD7 858 aaPredicted RBP14.36□□□□□ -0.11
RNF4-210ENST00000508235 RHBDD2Q6NTF9 364 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 CCDC81Q6ZN84 652 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 ZNF655Q8N720 491 aaPredicted RBP14.36□□□□□ -0.11
RNF4-210ENST00000508235 SLC5A11Q8WWX8 675 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 ZNF285Q96NJ3 590 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 OR4K3Q96R72 315 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 C17orf62Q9BQA9 187 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 CUEDC1Q9NWM3 386 aaPredicted RBP14.36□□□□□ -0.11
RNF4-210ENST00000508235 GPRC5BQ9NZH0 403 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 KCND3Q9UK17 655 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 ACACBO00763 2458 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 APC2O95996 2303 aa14.36□□□□□ -0.11
RNF4-210ENST00000508235 CEP295Q9C0D2 2601 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 KCNE1BA0A087WTH5 132 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 TEX51A0A1B0GUA7 166 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 FITM1A5D6W6 292 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 C21orf140B9A014 251 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 H0YGG7 62 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 MEN1O00255 615 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 HAT1O14929 419 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 STK16O75716 305 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 GNAZP19086 355 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 ITPKBP27987 946 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 RORAP35398 523 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 GMPRP36959 345 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 EMP3P54852 163 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 ALDH18A1P54886 795 aaKnown RBP14.35□□□□□ -0.11
RNF4-210ENST00000508235 ARF3P61204 181 aaPredicted RBP14.35□□□□□ -0.11
RNF4-210ENST00000508235 CSNK1G2P78368 415 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 IFFO1Q0D2I5 559 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 GPS2Q13227 327 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 TECRLQ5HYJ1 363 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 WASHC2DQ5SRD0 308 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 PRAMEF17Q5VTA0 474 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 FRMPD2BQ6IN97 320 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 LRRC70Q7Z2Q7 622 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 DSELQ8IZU8 1212 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 RIBC1Q8N443 379 aaPredicted RBP14.35□□□□□ -0.11
RNF4-210ENST00000508235 MREGQ8N565 214 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 OR4K1Q8NGD4 311 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 UBTD2Q8WUN7 234 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 HNRNPLLQ8WVV9 542 aaKnown RBP14.35□□□□□ -0.11
RNF4-210ENST00000508235 MR1Q95460 341 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 NEIL2Q969S2 332 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 SCYL1Q96KG9 808 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 GPR78Q96P69 363 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 OR2A5Q96R48 311 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 GPR87Q9BY21 358 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 CD244Q9BZW8 370 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 PELI2Q9HAT8 420 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 PCMTD2Q9NV79 361 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 DNAJC11Q9NVH1 559 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 TBK1Q9UHD2 729 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 TPRP12270 2363 aaKnown RBP14.35□□□□□ -0.11
RNF4-210ENST00000508235 SPTBP11277 2137 aa14.35□□□□□ -0.11
RNF4-210ENST00000508235 LOC105369274A0A096LPK9 316 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 LOC102723532A0A0G2JNH3 316 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 TRBC2A0A5B9 178 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 HYKKA2RU49 373 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 UBXN8O00124 270 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 CLGNO14967 610 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 TAPBPO15533 448 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 NRP2O60462 931 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 H2AFYO75367 372 aaKnown RBP14.34□□□□□ -0.11
RNF4-210ENST00000508235 RFPL1O75677 317 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 EIF2S1P05198 315 aaKnown RBP14.34□□□□□ -0.11
RNF4-210ENST00000508235 CD63P08962 238 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 PIM1P11309 404 aaPredicted RBP14.34□□□□□ -0.11
RNF4-210ENST00000508235 GFAPP14136 432 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 KRT15P19012 456 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 CXCR2P25025 360 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 DLSTP36957 453 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 KCNC1P48547 511 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 HSPA7P48741 367 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 CDC16Q13042 620 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 PDK4Q16654 411 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 METTL2BQ6P1Q9 378 aaKnown RBP14.34□□□□□ -0.11
RNF4-210ENST00000508235 ZNF517Q6ZMY9 492 aaPredicted RBP14.34□□□□□ -0.11
RNF4-210ENST00000508235 OR4N4Q8N0Y3 316 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 PLD6Q8N2A8 252 aaKnown RBP14.34□□□□□ -0.11
RNF4-210ENST00000508235 CSNK1A1LQ8N752 337 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 SLC38A9Q8NBW4 561 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 MRPL57Q9BQC6 102 aaKnown RBP14.34□□□□□ -0.11
RNF4-210ENST00000508235 AIF1LQ9BQI0 150 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 TMEM79Q9BSE2 394 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 SARGQ9BW04 601 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms