RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 UTP11Q9Y3A2 253 aaKnown RBP12.31□□□□□ -0.44
HDAC1-209ENST00000484305 FAM95CA0A1B0GW59 222 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 CXorf49A8MYA2 514 aaPredicted RBP12.3□□□□□ -0.44
HDAC1-209ENST00000484305 MASP2O00187 686 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 EIF3HO15372 352 aaKnown RBP eCLIP12.3□□□□□ -0.44
HDAC1-209ENST00000484305 CEACAM4O75871 244 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 ALBP02768 609 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 HIST1H2AGP0C0S8 130 aaPredicted RBP12.3□□□□□ -0.44
HDAC1-209ENST00000484305 HIST1H2ADP20671 130 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 PLTPP55058 493 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 TAS2R39P59534 338 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 RELAQ04206 551 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 ZNF460Q14592 562 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 SHISA6Q6ZSJ9 500 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 PPP1R32Q7Z5V6 425 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 CEP97Q8IW35 865 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 CSNK1A1LQ8N752 337 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 FBXO25Q8TCJ0 367 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 ALKBH8Q96BT7 664 aaKnown RBP12.3□□□□□ -0.44
HDAC1-209ENST00000484305 PDLIM5Q96HC4 596 aaKnown RBP12.3□□□□□ -0.44
HDAC1-209ENST00000484305 CABS1Q96KC9 395 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 HIST1H2AHQ96KK5 128 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 SPSB2Q99619 263 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 HIST1H2AJQ99878 128 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 H2AFJQ9BTM1 129 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 SLC25A23Q9BV35 468 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 SGPP1Q9BX95 441 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 SLC26A1Q9H2B4 701 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 WDR54Q9H977 334 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 ZNF304Q9HCX3 659 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 MLXIPLQ9NP71 852 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 TMEM184CQ9NVA4 438 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 ARL15Q9NXU5 204 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 UTP6Q9NYH9 597 aaKnown RBP12.3□□□□□ -0.44
HDAC1-209ENST00000484305 ANAPC2Q9UJX6 822 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 RUVBL1Q9Y265 456 aaKnown RBP12.3□□□□□ -0.44
HDAC1-209ENST00000484305 PCDHGA9Q9Y5G4 932 aaKnown RBP12.3□□□□□ -0.44
HDAC1-209ENST00000484305 SCN3AQ9NY46 2000 aa12.3□□□□□ -0.44
HDAC1-209ENST00000484305 DOCK10Q96BY6 2186 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 TENM4Q6N022 2769 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 TCRBV9S1A1TA0A576 114 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 A6NL46 340 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 P2RX6O15547 441 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 STATHP02808 62 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 NPPBP16860 134 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 ZNF37AP17032 561 aaPredicted RBP12.29□□□□□ -0.44
HDAC1-209ENST00000484305 PGDP52209 483 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 EMP3P54852 163 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 RRADP55042 308 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 GPX6P59796 221 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 SNRPNP63162 240 aaKnown RBP12.29□□□□□ -0.44
HDAC1-209ENST00000484305 SLC7A5Q01650 507 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 TLE1Q04724 770 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 KLRB1Q12918 225 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 MUM1Q2TAK8 710 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 PRMT9Q6P2P2 845 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 SBSNQ6UWP8 590 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 ZDHHC24Q6UX98 284 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 C3orf62Q6ZUJ4 267 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 ARHGEF39Q8N4T4 335 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 FDCSPQ8NFU4 85 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 RERGQ96A58 199 aaPredicted RBP12.29□□□□□ -0.44
HDAC1-209ENST00000484305 COL26A1Q96A83 441 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 PYCR2Q96C36 320 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 VPS39Q96JC1 886 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 IP6K3Q96PC2 410 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 NUDT9Q9BW91 350 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 PCBD2Q9H0N5 130 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 RAB17Q9H0T7 212 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 EPN3Q9H201 632 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 RHOJQ9H4E5 214 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 SOX17Q9H6I2 414 aaPredicted RBP12.29□□□□□ -0.44
HDAC1-209ENST00000484305 P4HTMQ9NXG6 502 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 NSMCE4AQ9NXX6 385 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 CDC23Q9UJX2 597 aa12.29□□□□□ -0.44
HDAC1-209ENST00000484305 MTO1Q9Y2Z2 717 aaKnown RBP12.29□□□□□ -0.44
HDAC1-209ENST00000484305 ESYT3A0FGR9 886 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 FEZF1A0PJY2 475 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 FAM159BA6NKW6 160 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 VSTM2BA6NLU5 285 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 CDC7O00311 574 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 PEX12O00623 359 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 URI1O94763 535 aaPredicted RBP12.28□□□□□ -0.44
HDAC1-209ENST00000484305 ZIC2O95409 532 aaPredicted RBP12.28□□□□□ -0.44
HDAC1-209ENST00000484305 GUCA1CO95843 209 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 C1QAP02745 245 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 ENO2P09104 434 aaPredicted RBP12.28□□□□□ -0.44
HDAC1-209ENST00000484305 CDH1P12830 882 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 MMP11P24347 488 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 CCND1P24385 295 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 HRH2P25021 359 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 CASRP41180 1078 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 AP1S2P56377 157 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 CSNK1G2P78368 415 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 CAV1Q03135 178 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 CKAP4Q07065 602 aaKnown RBP12.28□□□□□ -0.44
HDAC1-209ENST00000484305 RAPSNQ13702 412 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 PPP1R3AQ16821 1122 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 DCAF10Q5QP82 559 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 CAPN13Q6MZZ7 669 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms