RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 SLC39A11Q8N1S5 342 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 AMER2Q8N7J2 671 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF513Q8N8E2 541 aaPredicted RBP8.21□□□□□ -1.1
PTPRK-206ENST00000368215 OR8J3Q8NGG0 315 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 OR2T11Q8NH01 316 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 HSPBAP1Q96EW2 488 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 TEX37Q96LM6 180 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF641Q96N77 438 aaPredicted RBP8.21□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF607Q96SK3 696 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 INPP5KQ9BT40 448 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 C1QTNF7Q9BXJ2 289 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 RETREG1Q9H6L5 497 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 C11orf16Q9NQ32 467 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 SEMA3GQ9NS98 782 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 MAP10Q9P2G4 905 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF282Q9UDV7 671 aaPredicted RBP8.21□□□□□ -1.1
PTPRK-206ENST00000368215 CDC14AQ9UNH5 594 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 ADAMDEC1O15204 470 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 C6orf47O95873 294 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 TSPAN19P0C672 248 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 BMP2P12643 396 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF182P17025 639 aaPredicted RBP8.21□□□□□ -1.1
PTPRK-206ENST00000368215 CLCNKAP51800 687 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 PPIGQ13427 754 aaKnown RBP eCLIP8.21□□□□□ -1.17e-7■□□□□ 9.8
PTPRK-206ENST00000368215 SCARB2Q14108 478 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 SELPLGQ14242 412 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 PRAMEF14Q5SWL7 426 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.21□□□□□ -1.13e-6■■■■■ 29.3
PTPRK-206ENST00000368215 IER5LQ5T953 404 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 PRAMEF13Q5VWM6 474 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 VITQ6UXI7 678 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 PRR23BQ6ZRT6 265 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 CNIH3Q8TBE1 160 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 FAM110BQ8TC76 370 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 GLYATL1Q969I3 302 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 TCEAL4Q96EI5 215 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF419Q96HQ0 510 aaPredicted RBP8.21□□□□□ -1.1
PTPRK-206ENST00000368215 EGLN2Q96KS0 407 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 CHCHD6Q9BRQ6 235 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 SLC7A5P2Q9GIP4 190 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 PHF24Q9UPV7 400 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 NCKAP1Q9Y2A7 1128 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 SLC9A8Q9Y2E8 581 aa8.21□□□□□ -1.1
PTPRK-206ENST00000368215 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-206ENST00000368215 TCRBV3S1A0A5B6 114 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 EFCAB10A6NFE3 127 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 E2F3O00716 465 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 ACOT8O14734 319 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 TRIM24O15164 1050 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 GUCY1B2O75343 617 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 GSTM5P46439 218 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 PLEKHS1Q5SXH7 462 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 FAM129CQ86XR2 697 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 LMNTD1Q8N9Z9 388 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 POC5Q8NA72 575 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 NFKBIDQ8NI38 313 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 PIH1D2Q8WWB5 315 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 TFGQ92734 400 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-206ENST00000368215 MAELQ96JY0 434 aaKnown RBP8.2□□□□□ -1.1
PTPRK-206ENST00000368215 BIRC8Q96P09 236 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 PKP4Q99569 1192 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 COPS4Q9BT78 406 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 EFCAB11Q9BUY7 163 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 TTLL2Q9BWV7 592 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 SLC46A2Q9BY10 475 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 KCNH6Q9H252 994 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 EHD3Q9NZN3 535 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 ERGIC3Q9Y282 383 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 PCDHB14Q9Y5E9 798 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 DNTTP04053 509 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 NOS3P29474 1203 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 DNAJA1P31689 397 aaKnown RBP8.2□□□□□ -1.1
PTPRK-206ENST00000368215 VIPR2P41587 438 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 SEPHS1P49903 392 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 ENTPD1P49961 510 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 PON2Q15165 354 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 TEAD4Q15561 434 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 CARTPTQ16568 116 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 ARMC4Q5T2S8 1044 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 EGFLAMQ63HQ2 1017 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 CXorf57Q6NSI4 855 aaKnown RBP8.2□□□□□ -1.1
PTPRK-206ENST00000368215 VTCN1Q7Z7D3 282 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 TICAM1Q8IUC6 712 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 NPAS3Q8IXF0 933 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 PELI3Q8N2H9 469 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 FLCNQ8NFG4 579 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 OR10G2Q8NGC3 310 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 DNAJB8Q8NHS0 232 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 WDR36Q8NI36 951 aaKnown RBP8.2□□□□□ -1.1
PTPRK-206ENST00000368215 BCL7CQ8WUZ0 217 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-206ENST00000368215 ISOC1Q96CN7 298 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 TRIT1Q9H3H1 467 aaKnown RBP8.2□□□□□ -1.1
PTPRK-206ENST00000368215 GPRC5BQ9NZH0 403 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 EBF1Q9UH73 591 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 TMED5Q9Y3A6 229 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF99A8MXY4 864 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-206ENST00000368215 CACNB4O00305 520 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-206ENST00000368215 ZW10O43264 779 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 B4GAT1O43505 415 aa8.2□□□□□ -1.1
PTPRK-206ENST00000368215 CACNG3O60359 315 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms