RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 KRT6BP04259 564 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 PRR35P0CG20 571 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 CDH1P12830 882 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 KRT6CP48668 564 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 REEP5Q00765 189 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 ZNF33BQ06732 778 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 KIR2DS3Q14952 304 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 ABRAXAS2Q15018 415 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 LPAL2Q16609 132 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 CPSF6Q16630 551 aaKnown RBP eCLIP14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 LSM12Q3MHD2 195 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 C14orf28Q4W4Y0 310 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 TRIM61Q5EBN2 209 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 Q6ZSR9 355 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 ACAD11Q709F0 780 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 LARP4Q71RC2 724 aaKnown RBP eCLIP14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 TRIM46Q7Z4K8 759 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 TMPRSS11BQ86T26 416 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 ALYREFQ86V81 257 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 LAS2Q8IYD9 372 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 KYQ8NBH2 561 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 OR2T11Q8NH01 316 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 WDR20Q8TBZ3 569 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 SH3KBP1Q96B97 665 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 ACAT2Q9BWD1 397 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 SPNS1Q9H2V7 528 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 ZNF490Q9ULM2 529 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 SNX6Q9UNH7 406 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 TSC22D4Q9Y3Q8 395 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 IGKV1-8A0A0C4DH67 115 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 NPIPB8E9PQR5 432 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 ARHGAP33O14559 1287 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 VPS4BO75351 444 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 DCTN3O75935 186 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 CCNDBP1O95273 360 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 FKBP9O95302 570 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 LINC00032P0C843 101 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 MPLP40238 635 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 LAPTM5Q13571 262 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 SLBPQ14493 270 aaKnown RBP eCLIP14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 PLCL1Q15111 1095 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 PAGE2BQ5JRK9 111 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 PLA2G2CQ5R387 149 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 METTL21CQ5VZV1 264 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 FRG2Q64ET8 278 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 FAM91A1Q658Y4 838 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 SCIMPQ6UWF3 145 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 CHSY3Q70JA7 882 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 ZNF438Q7Z4V0 828 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 MTDHQ86UE4 582 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 MYLK4Q86YV6 388 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 DDIASQ8IXT1 998 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 SLC35F3Q8IY50 421 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 OR2L3Q8NG85 312 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 CEP70Q8NHQ1 597 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 SLC22A18Q96BI1 424 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 PPP1R36Q96LQ0 422 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 RILPQ96NA2 401 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 FRG2BQ96QU4 278 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 OR2A14Q96R47 310 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 PITHD1Q9GZP4 211 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 ZNF385DQ9H6B1 395 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 GAREM1Q9H706 876 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 NT5DC2Q9H857 520 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 IL21RQ9HBE5 538 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 SLC6A20Q9NP91 592 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 PFDN4Q9NQP4 134 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 FARSBQ9NSD9 589 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 NLGN3Q9NZ94 848 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 ENTPD2Q9Y5L3 495 aa14.19□□□□□ -0.14
SHKBP1-211ENST00000595945 PIPSLA2A3N6 862 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 OR6C74A6NCV1 312 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 FCHO1O14526 889 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 ULK1O75385 1050 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 CER1O95813 267 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 PDYNP01213 254 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 SERPINA6P08185 405 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 SYPP08247 313 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 UGT2B7P16662 529 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 PRPH2P23942 346 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 HRH2P25021 359 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 CCT8P50990 548 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 CCR8P51685 355 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 CSNK1G2P78368 415 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 C10orf62Q5T681 223 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 LAIR1Q6GTX8 287 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 ZNF425Q6IV72 752 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 OGFOD2Q6N063 350 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 MED27Q6P2C8 311 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 ZC3H14Q6PJT7 736 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 FITM2Q8N6M3 262 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 ARL10Q8N8L6 244 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 OR7G3Q8NG95 312 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 OR4C6Q8NH72 309 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 TBC1D10AQ9BXI6 508 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 NMUR2Q9GZQ4 415 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 ARRDC1-AS1Q9H2J1 176 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 ELOVL6Q9H5J4 265 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 AKTIPQ9H8T0 292 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms