RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 TBK1Q9UHD2 729 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 PTBP2Q9UKA9 531 aaKnown RBP18.67■□□□□ 0.58
DDX55-207ENST00000540763 TMCO1Q9UM00 188 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 SNX7Q9UNH6 387 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 PLCL2Q9UPR0 1127 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 DSPP15924 2871 aaKnown RBP18.66■□□□□ 0.58
DDX55-207ENST00000540763 IGKV1-8A0A0C4DH67 115 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 CTIFO43310 598 aaKnown RBP18.66■□□□□ 0.58
DDX55-207ENST00000540763 GSTA1P08263 222 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 EZRP15311 586 aaKnown RBP18.66■□□□□ 0.58
DDX55-207ENST00000540763 SLCO1A2P46721 670 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 GPR19Q15760 415 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 PAQR7Q86WK9 346 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 PROSER1Q86XN7 944 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 FAM20CQ8IXL6 584 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 PLD6Q8N2A8 252 aaKnown RBP18.66■□□□□ 0.58
DDX55-207ENST00000540763 UBTD2Q8WUN7 234 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 HNRNPLLQ8WVV9 542 aaKnown RBP18.66■□□□□ 0.58
DDX55-207ENST00000540763 PCMTD2Q9NV79 361 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 TMEM184CQ9NVA4 438 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 WWOXQ9NZC7 414 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 FOXJ2Q9P0K8 574 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 LGALS13Q9UHV8 139 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 SERTAD3Q9UJW9 196 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 PLAAQ9Y263 795 aa18.66■□□□□ 0.58
DDX55-207ENST00000540763 TMEM184BQ9Y519 407 aaPredicted RBP18.66■□□□□ 0.58
DDX55-207ENST00000540763 KLK8O60259 260 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 MT-ND3P03897 115 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 MTHFD2P13995 350 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 NPPBP16860 134 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 KRT15P19012 456 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 GLRBP48167 497 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 KCNC1P48547 511 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 COL9A2Q14055 689 aaPredicted RBP18.65■□□□□ 0.58
DDX55-207ENST00000540763 MAP7Q14244 749 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 METTL2BQ6P1Q9 378 aaKnown RBP18.65■□□□□ 0.58
DDX55-207ENST00000540763 THOC6Q86W42 341 aaKnown RBP18.65■□□□□ 0.58
DDX55-207ENST00000540763 OR2W6PQ8NHA6 318 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 N4BP2L2Q92802 583 aaPredicted RBP18.65■□□□□ 0.58
DDX55-207ENST00000540763 PMEPA1Q969W9 287 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 PYCR2Q96C36 320 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 OR4K3Q96R72 315 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 MRPL57Q9BQC6 102 aaKnown RBP18.65■□□□□ 0.58
DDX55-207ENST00000540763 TMEM79Q9BSE2 394 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 SPRY4Q9C004 299 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 PILRAQ9UKJ1 303 aa18.65■□□□□ 0.58
DDX55-207ENST00000540763 FASNP49327 2511 aaKnown RBP18.64■□□□□ 0.57
DDX55-207ENST00000540763 NCF1BA6NI72 391 aaPredicted RBP18.64■□□□□ 0.57
DDX55-207ENST00000540763 SMIM23A6NLE4 172 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 NCF1CA8MVU1 366 aaPredicted RBP18.64■□□□□ 0.57
DDX55-207ENST00000540763 SUPT3HB4E1H0 165 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 TMEM150CB9EJG8 249 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 H3BMH7 237 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 STMND1H3BQB6 276 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 TAF4O00268 1085 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 SUPT3HO75486 399 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 NCF1P14598 390 aaPredicted RBP18.64■□□□□ 0.57
DDX55-207ENST00000540763 ITGA1P56199 1179 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 CROCCP2Q86T23 111 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 ZNF248Q8NDW4 579 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 ABHD11Q8NFV4 315 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 ZNF285Q96NJ3 590 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 CTRCQ99895 268 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 ZFYVE21Q9BQ24 234 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 CAPS2Q9BXY5 557 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 MRPL46Q9H2W6 279 aaKnown RBP18.64■□□□□ 0.57
DDX55-207ENST00000540763 GPRC5BQ9NZH0 403 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 KLHL20Q9Y2M5 609 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 PCDHB3Q9Y5E6 796 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 KCNE2Q9Y6J6 123 aa18.64■□□□□ 0.57
DDX55-207ENST00000540763 APC2O95996 2303 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 UBXN8O00124 270 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 MAP2K7O14733 419 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 TAPBPO15533 448 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 TLX3O43711 291 aaPredicted RBP18.63■□□□□ 0.57
DDX55-207ENST00000540763 SRPX2O60687 465 aaPredicted RBP18.63■□□□□ 0.57
DDX55-207ENST00000540763 CTSVO60911 334 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 STK16O75716 305 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 WDR47O94967 919 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 DLGAP3O95886 979 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 LIPCP11150 499 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 ALDH18A1P54886 795 aaKnown RBP18.63■□□□□ 0.57
DDX55-207ENST00000540763 YBX1P67809 324 aaKnown RBP18.63■□□□□ 0.57
DDX55-207ENST00000540763 SETDB1Q15047 1291 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 TCTE1Q5JU00 501 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 TLDC1Q6P9B6 456 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 SH2D5Q6ZV89 423 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 LRRC70Q7Z2Q7 622 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 GPR135Q8IZ08 494 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 IQCKQ8N0W5 287 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 CYP4X1Q8N118 509 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 OR1L3Q8NH93 324 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 EXT2Q93063 718 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 ALKBH8Q96BT7 664 aaKnown RBP18.63■□□□□ 0.57
DDX55-207ENST00000540763 LRFN5Q96NI6 719 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 SARGQ9BW04 601 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 ABCF3Q9NUQ8 709 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 CUEDC1Q9NWM3 386 aaPredicted RBP18.63■□□□□ 0.57
DDX55-207ENST00000540763 XPR1Q9UBH6 696 aa18.63■□□□□ 0.57
DDX55-207ENST00000540763 DCDC2Q9UHG0 476 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms