RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 ACAT2Q9BWD1 397 aa19.99■□□□□ 0.79
CHKA-206ENST00000531341 ZNF700Q9H0M5 742 aa19.99■□□□□ 0.79
CHKA-206ENST00000531341 STMN3Q9NZ72 180 aa19.99■□□□□ 0.79
CHKA-206ENST00000531341 LOC102723996A0A087X1L8 192 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 TCRBV7S2A1N4TA0A589 114 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 OR5H15A6NDH6 313 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 PSMD3O43242 534 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 ZNHIT1O43257 154 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 FKBP9O95302 570 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 HEXBP07686 556 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 DSG2Q14126 1118 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 FASTKD1Q53R41 847 aaKnown RBP19.98■□□□□ 0.79
CHKA-206ENST00000531341 MTFR2Q6P444 385 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 RIPOR1Q6ZS17 1223 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 NEK10Q6ZWH5 1172 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 ARHGEF39Q8N4T4 335 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 IMMP1LQ96LU5 166 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 TTC1Q99614 292 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 TSSK1BQ9BXA7 367 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 RAB11FIP5Q9BXF6 653 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 RNF32Q9H0A6 362 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 RIC8BQ9NVN3 520 aa19.98■□□□□ 0.79
CHKA-206ENST00000531341 TSR3Q9UJK0 312 aaKnown RBP19.98■□□□□ 0.79
CHKA-206ENST00000531341 RUVBL1Q9Y265 456 aaKnown RBP19.98■□□□□ 0.79
CHKA-206ENST00000531341 CPAMD8Q8IZJ3 1885 aa19.97■□□□□ 0.79
CHKA-206ENST00000531341 IGKV1-8A0A0C4DH67 115 aa19.97■□□□□ 0.79
CHKA-206ENST00000531341 FOXS1O43638 330 aa19.97■□□□□ 0.79
CHKA-206ENST00000531341 ERVK-10P10266 1014 aa19.97■□□□□ 0.79
CHKA-206ENST00000531341 ZNF33BQ06732 778 aa19.97■□□□□ 0.79
CHKA-206ENST00000531341 CDH17Q12864 832 aa19.97■□□□□ 0.79
CHKA-206ENST00000531341 P3H1Q32P28 736 aa19.97■□□□□ 0.79
CHKA-206ENST00000531341 TTC23LQ6PF05 361 aa19.97■□□□□ 0.79
CHKA-206ENST00000531341 TMEM205Q6UW68 189 aa19.97■□□□□ 0.79
CHKA-206ENST00000531341 LINC00523Q86TU6 105 aa19.97■□□□□ 0.79
CHKA-206ENST00000531341 MMABQ96EY8 250 aaPredicted RBP19.97■□□□□ 0.79
CHKA-206ENST00000531341 P2RY12Q9H244 342 aa19.97■□□□□ 0.79
CHKA-206ENST00000531341 ETNK1Q9HBU6 452 aa19.97■□□□□ 0.79
CHKA-206ENST00000531341 IGHV3-20A0A0C4DH32 117 aa19.96■□□□□ 0.79
CHKA-206ENST00000531341 F8W8V4 182 aa19.96■□□□□ 0.79
CHKA-206ENST00000531341 ADRA1DP25100 572 aa19.96■□□□□ 0.79
CHKA-206ENST00000531341 MAT1AQ00266 395 aaKnown RBP19.96■□□□□ 0.79
CHKA-206ENST00000531341 RBPJQ06330 500 aa19.96■□□□□ 0.79
CHKA-206ENST00000531341 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.96■□□□□ 0.79
CHKA-206ENST00000531341 FCRLBQ6BAA4 426 aa19.96■□□□□ 0.79
CHKA-206ENST00000531341 LRRC8BQ6P9F7 803 aa19.96■□□□□ 0.79
CHKA-206ENST00000531341 SUSD1Q6UWL2 747 aa19.96■□□□□ 0.79
CHKA-206ENST00000531341 ZC3H7AQ8IWR0 971 aaKnown RBP19.96■□□□□ 0.79
CHKA-206ENST00000531341 SUN3Q8TAQ9 357 aa19.96■□□□□ 0.79
CHKA-206ENST00000531341 SLC35B2Q8TB61 432 aa19.96■□□□□ 0.79
CHKA-206ENST00000531341 SKA2Q8WVK7 121 aaPredicted RBP19.96■□□□□ 0.79
CHKA-206ENST00000531341 MTFMTQ96DP5 389 aaKnown RBP19.96■□□□□ 0.79
CHKA-206ENST00000531341 HES7Q9BYE0 225 aa19.96■□□□□ 0.79
CHKA-206ENST00000531341 TGIF2Q9GZN2 237 aa19.96■□□□□ 0.79
CHKA-206ENST00000531341 RIMKLBQ9ULI2 386 aa19.96■□□□□ 0.79
CHKA-206ENST00000531341 A0A0A6YYC8 382 aaPredicted RBP19.95■□□□□ 0.78
CHKA-206ENST00000531341 A8MUI8 341 aa19.95■□□□□ 0.78
CHKA-206ENST00000531341 I3L1I5 382 aaPredicted RBP19.95■□□□□ 0.78
CHKA-206ENST00000531341 PRMT5O14744 637 aaPredicted RBP19.95■□□□□ 0.78
CHKA-206ENST00000531341 KLF1Q13351 362 aaPredicted RBP19.95■□□□□ 0.78
CHKA-206ENST00000531341 ZNF766Q5HY98 468 aa19.95■□□□□ 0.78
CHKA-206ENST00000531341 ABHD17BQ5VST6 288 aa19.95■□□□□ 0.78
CHKA-206ENST00000531341 PTRHD1Q6GMV3 140 aaKnown RBP19.95■□□□□ 0.78
CHKA-206ENST00000531341 PRUNE1Q86TP1 453 aa19.95■□□□□ 0.78
CHKA-206ENST00000531341 CSNK1A1LQ8N752 337 aa19.95■□□□□ 0.78
CHKA-206ENST00000531341 SIGLEC12Q96PQ1 595 aa19.95■□□□□ 0.78
CHKA-206ENST00000531341 PLCD4Q9BRC7 762 aa19.95■□□□□ 0.78
CHKA-206ENST00000531341 TSPAN10Q9H1Z9 355 aaPredicted RBP19.95■□□□□ 0.78
CHKA-206ENST00000531341 C14orf105Q9NVL8 296 aa19.95■□□□□ 0.78
CHKA-206ENST00000531341 MKL2Q9ULH7 1088 aa19.95■□□□□ 0.78
CHKA-206ENST00000531341 CDC14AQ9UNH5 594 aa19.95■□□□□ 0.78
CHKA-206ENST00000531341 ZNF835Q9Y2P0 537 aa19.95■□□□□ 0.78
CHKA-206ENST00000531341 TCAF1Q9Y4C2 921 aa19.95■□□□□ 0.78
CHKA-206ENST00000531341 SUN1O94901 812 aa19.94■□□□□ 0.78
CHKA-206ENST00000531341 ESRRAP11474 423 aaPredicted RBP19.94■□□□□ 0.78
CHKA-206ENST00000531341 AGAP20933 346 aa19.94■□□□□ 0.78
CHKA-206ENST00000531341 CMPK1P30085 196 aa19.94■□□□□ 0.78
CHKA-206ENST00000531341 EMP3P54852 163 aa19.94■□□□□ 0.78
CHKA-206ENST00000531341 NAP1L1P55209 391 aaKnown RBP19.94■□□□□ 0.78
CHKA-206ENST00000531341 PRAMEP78395 509 aa19.94■□□□□ 0.78
CHKA-206ENST00000531341 TMED2Q15363 201 aa19.94■□□□□ 0.78
CHKA-206ENST00000531341 PAQR7Q86WK9 346 aa19.94■□□□□ 0.78
CHKA-206ENST00000531341 LRRC57Q8N9N7 239 aa19.94■□□□□ 0.78
CHKA-206ENST00000531341 OR2A5Q96R48 311 aa19.94■□□□□ 0.78
CHKA-206ENST00000531341 MKKSQ9NPJ1 570 aaPredicted RBP19.94■□□□□ 0.78
CHKA-206ENST00000531341 CHRAC1Q9NRG0 131 aa19.94■□□□□ 0.78
CHKA-206ENST00000531341 CATSPERZQ9NTU4 200 aa19.94■□□□□ 0.78
CHKA-206ENST00000531341 PACSIN2Q9UNF0 486 aaPredicted RBP19.94■□□□□ 0.78
CHKA-206ENST00000531341 PCNX1Q96RV3 2341 aa19.94■□□□□ 0.78
CHKA-206ENST00000531341 NCOA6Q14686 2063 aaPredicted RBP19.94■□□□□ 0.78
CHKA-206ENST00000531341 GRID2IPA4D2P6 1211 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 OR2W5A6NFC9 320 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 FAM227AF5H4B4 570 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 CD3EAPO15446 510 aaKnown RBP19.93■□□□□ 0.78
CHKA-206ENST00000531341 P2RX6O15547 441 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 ZNF189O75820 626 aaPredicted RBP19.93■□□□□ 0.78
CHKA-206ENST00000531341 SEC24DO94855 1032 aaPredicted RBP19.93■□□□□ 0.78
CHKA-206ENST00000531341 CLDN14O95500 239 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 SSTR2P30874 369 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 CETN2P41208 172 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 SPA17Q15506 151 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms