RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TRIM63Q969Q1 353 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 HSH2DQ96JZ2 352 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 SLC30A2Q9BRI3 323 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 ZBED2Q9BTP6 218 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 KATNAL1Q9BW62 490 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 CINPQ9BW66 212 aaPredicted RBP17.24■□□□□ 0.35
NUP54-205ENST00000507257 SARS2Q9NP81 518 aaKnown RBP17.24■□□□□ 0.35
NUP54-205ENST00000507257 TBC1D24Q9ULP9 559 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 hCG_2039718K7EN88 272 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 FFAR3O14843 346 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 GPR42O15529 346 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 SLITRK5O94991 958 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 SEMA3DO95025 777 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 CDKN2CP42773 168 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 E2F2Q14209 437 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 TMC5Q6UXY8 1006 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 SCN4BQ8IWT1 228 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 GRPEL2Q8TAA5 225 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 C7orf34Q96L11 122 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 ADGRE3Q9BY15 652 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 OR51E2Q9H255 320 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 WWOXQ9NZC7 414 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 UBA2Q9UBT2 640 aaPredicted RBP17.23■□□□□ 0.35
NUP54-205ENST00000507257 CAB39Q9Y376 341 aaPredicted RBP17.23■□□□□ 0.35
NUP54-205ENST00000507257 TRPV2Q9Y5S1 764 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 HMX3A6NHT5 357 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 ANKRD66B4E2M5 251 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 MFN2O95140 757 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 CD72P21854 359 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 CSTF3Q12996 717 aaKnown RBP17.23■□□□□ 0.35
NUP54-205ENST00000507257 GGTA1PQ4G0N0 100 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 ARMCX4Q5H9R4 360 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 CDKL4Q5MAI5 379 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 C10orf62Q5T681 223 aaPredicted RBP17.23■□□□□ 0.35
NUP54-205ENST00000507257 NEK5Q6P3R8 708 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 SPATC1Q76KD6 591 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 CIR1Q86X95 450 aaPredicted RBP17.23■□□□□ 0.35
NUP54-205ENST00000507257 CENPOQ9BU64 300 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 ACPTQ9BZG2 426 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 ASAH2Q9NR71 780 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 TAS2R9Q9NYW1 312 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 PCDHB8Q9UN66 801 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 DLGAP4Q9Y2H0 992 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 PADI2Q9Y2J8 665 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 SLC45A1Q9Y2W3 748 aa17.23■□□□□ 0.35
NUP54-205ENST00000507257 SERTM1A2A2V5 107 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 LOC730098B7Z3J9 87 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 PRMT3O60678 531 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 CHRNB1P11230 501 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 EPB42P16452 691 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 PRKCAP17252 672 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 GABRB1P18505 474 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 MAGP20916 626 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 DGKAP23743 735 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 RGRP47804 291 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 GNG2P59768 71 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 MRPS15P82914 257 aaKnown RBP17.22■□□□□ 0.35
NUP54-205ENST00000507257 SLC14A1Q13336 389 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 TUSC3Q13454 348 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 DUOXA1Q1HG43 343 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 ZCCHC8Q6NZY4 707 aaKnown RBP17.22■□□□□ 0.35
NUP54-205ENST00000507257 ZNF517Q6ZMY9 492 aaPredicted RBP17.22■□□□□ 0.35
NUP54-205ENST00000507257 PTOV1Q86YD1 416 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 RAB43Q86YS6 212 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 DEPDC7Q96QD5 511 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 C19orf43Q9BQ61 176 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 CDCA4Q9BXL8 241 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 RNF38Q9H0F5 515 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 MIR1-1HGQ9H1L0 117 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 DYRK4Q9NR20 520 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 TRMT13Q9NUP7 481 aaKnown RBP17.22■□□□□ 0.35
NUP54-205ENST00000507257 PPT2Q9UMR5 302 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 SNX6Q9UNH7 406 aa17.22■□□□□ 0.35
NUP54-205ENST00000507257 LOC100506127A0A0U1RQW1 187 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 SLC35F4A4IF30 521 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 FAM25AB3EWG3 89 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 FAM25CB3EWG5 89 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 FAM25GB3EWG6 89 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 M0QZ92 97 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 CLIC1O00299 241 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 ARHGAP33O14559 1287 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 KDELR3O43731 214 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 DIRAS1O95057 198 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 CLDN9O95484 217 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 F11P03951 625 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 CTPS1P17812 591 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 CA5AP35218 305 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 HNF4AP41235 474 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 BOP1Q14137 746 aaKnown RBP17.21■□□□□ 0.35
NUP54-205ENST00000507257 BCL7AQ4VC05 210 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 PAN2Q504Q3 1202 aaKnown RBP17.21■□□□□ 0.35
NUP54-205ENST00000507257 GPR142Q7Z601 462 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 VTCN1Q7Z7D3 282 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 TLK2Q86UE8 772 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 RNF130Q86XS8 419 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 CYP4Z2PQ8N1L4 340 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 CLHC1Q8NHS4 586 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 ULK4Q96C45 1275 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 CMTM7Q96FZ5 175 aa17.21■□□□□ 0.35
NUP54-205ENST00000507257 FCRL1Q96LA6 429 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms