RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 HIBCHQ6NVY1 386 aaPredicted RBP10.14□□□□□ -0.79
NELFE-213ENST00000494956 NEK10Q6ZWH5 1172 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 UBE2R2Q712K3 238 aaPredicted RBP10.14□□□□□ -0.79
NELFE-213ENST00000494956 PAQR7Q86WK9 346 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 RAB43Q86YS6 212 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 TTC29Q8NA56 475 aaPredicted RBP10.14□□□□□ -0.79
NELFE-213ENST00000494956 ALKBH8Q96BT7 664 aaKnown RBP10.14□□□□□ -0.79
NELFE-213ENST00000494956 CERS2Q96G23 380 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 C10orf90Q96M02 699 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 KRT12Q99456 494 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 SPSB2Q99619 263 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 ZFYVE21Q9BQ24 234 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 MACROD1Q9BQ69 325 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 PLCD4Q9BRC7 762 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 DHRS4Q9BTZ2 278 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 PPANQ9NQ55 473 aaKnown RBP10.14□□□□□ -0.79
NELFE-213ENST00000494956 P4HTMQ9NXG6 502 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 TRMT6Q9UJA5 497 aaKnown RBP10.14□□□□□ -0.79
NELFE-213ENST00000494956 IKZF3Q9UKT9 509 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 PDE10AQ9Y233 779 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 PADI2Q9Y2J8 665 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 MRPS2Q9Y399 296 aaKnown RBP10.14□□□□□ -0.79
NELFE-213ENST00000494956 MRFAP1Q9Y605 127 aa10.14□□□□□ -0.79
NELFE-213ENST00000494956 FITM1A5D6W6 292 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 CYSRT1A8MQ03 144 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 RPL21P46778 160 aaKnown RBP10.13□□□□□ -0.79
NELFE-213ENST00000494956 ARSFP54793 590 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 PRDX1Q06830 199 aaKnown RBP10.13□□□□□ -0.79
NELFE-213ENST00000494956 C2orf54Q08AI8 447 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 SYT16Q17RD7 645 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 ZXDCQ2QGD7 858 aaPredicted RBP10.13□□□□□ -0.79
NELFE-213ENST00000494956 VWA2Q5GFL6 755 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 TCTE1Q5JU00 501 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 DCAF10Q5QP82 559 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 THEMIS2Q5TEJ8 643 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 ZNF425Q6IV72 752 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 CAPN12Q6ZSI9 719 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 MED25Q71SY5 747 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 OVCH1Q7RTY7 1134 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 ADCK2Q7Z695 626 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 PCGF5Q86SE9 256 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 LMNTD2Q8IXW0 634 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 RBMXL3Q8N7X1 1067 aaKnown RBP10.13□□□□□ -0.79
NELFE-213ENST00000494956 GPATCH11Q8N954 259 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 TMEM102Q8N9M5 508 aaPredicted RBP10.13□□□□□ -0.79
NELFE-213ENST00000494956 PTERQ96BW5 349 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 LINGO1Q96FE5 620 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 OLFM1Q99784 485 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 ATG10Q9H0Y0 220 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 ZBTB20Q9HC78 741 aaPredicted RBP10.13□□□□□ -0.79
NELFE-213ENST00000494956 FAM114A2Q9NRY5 505 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 RUVBL1Q9Y265 456 aaKnown RBP10.13□□□□□ -0.79
NELFE-213ENST00000494956 SNX24Q9Y343 169 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 PCDHGA9Q9Y5G4 932 aaKnown RBP10.13□□□□□ -0.79
NELFE-213ENST00000494956 KLK4Q9Y5K2 254 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 PSAT1Q9Y617 370 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 TEX264Q9Y6I9 313 aa10.13□□□□□ -0.79
NELFE-213ENST00000494956 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.13□□□□□ -0.79
NELFE-213ENST00000494956 NBASA2RRP1 2371 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 SCN2AQ99250 2005 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 SHANK1Q9Y566 2161 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 EFCAB8A8MWE9 144 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 H7BY64 318 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 SOCS6O14544 535 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 ZBTB14O43829 449 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 SRPX2O60687 465 aaPredicted RBP10.12□□□□□ -0.79
NELFE-213ENST00000494956 SEC31AO94979 1220 aaKnown RBP10.12□□□□□ -0.79
NELFE-213ENST00000494956 FKBP9O95302 570 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 TSPAN12O95859 305 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 ENO3P13929 434 aaPredicted RBP10.12□□□□□ -0.79
NELFE-213ENST00000494956 SKIV2L2P42285 1042 aaKnown RBP10.12□□□□□ -0.79
NELFE-213ENST00000494956 UQCRFS1P47985 274 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 TBPL1P62380 186 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 SRSF1Q07955 248 aaKnown RBP eCLIP10.12□□□□□ -0.79
NELFE-213ENST00000494956 PDIA2Q13087 525 aaKnown RBP10.12□□□□□ -0.79
NELFE-213ENST00000494956 ARHGAP19Q14CB8 494 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 MORF4L2Q15014 288 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 PRTGQ2VWP7 1150 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 HECTD2Q5U5R9 776 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 TMEM207Q6UWW9 146 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 LAPTM4BQ86VI4 370 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 CNTN4Q8IWV2 1026 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 PARP9Q8IXQ6 854 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 Q8NA96 180 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 FBXO15Q8NCQ5 510 aaPredicted RBP10.12□□□□□ -0.79
NELFE-213ENST00000494956 FBXO36Q8NEA4 188 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 ANP32BQ92688 251 aaKnown RBP10.12□□□□□ -0.79
NELFE-213ENST00000494956 COL26A1Q96A83 441 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 MIB2Q96AX9 1013 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 C8orf44Q96CB5 159 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 CABS1Q96KC9 395 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 PRAP1Q96NZ9 151 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 OR2A5Q96R48 311 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 C17orf62Q9BQA9 187 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 DPH5Q9H2P9 285 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 ZNF304Q9HCX3 659 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 GPR83Q9NYM4 423 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 KLHL42Q9P2K6 505 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 CDC23Q9UJX2 597 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 CSAG2Q9Y5P2 127 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms