RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CTRCQ99895 268 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 LRRCC1Q9C099 1032 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 PNNQ9H307 717 aaKnown RBP1.77□□□□□ -2.13
CCDC93-209ENST00000488908 KRT84Q9NSB2 600 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 IGHV3-20A0A0C4DH32 117 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 ANKUB1A6NFN9 424 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 ARPC2O15144 300 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 MT-ND1P03886 318 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 GP1BBP13224 206 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 PSMA4P25789 261 aaKnown RBP1.76□□□□□ -2.13
CCDC93-209ENST00000488908 CCR9P51686 369 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 CASP6P55212 293 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 SIRPAP78324 504 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 ACY1Q03154 408 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 KLC1Q07866 573 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 TMEM154Q6P9G4 183 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 KLHL35Q6PF15 583 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 CPLX4Q7Z7G2 160 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 NFAM1Q8NET5 270 aaPredicted RBP1.76□□□□□ -2.13
CCDC93-209ENST00000488908 SSMEM1Q8WWF3 244 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 KCNK15Q9H427 330 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 HACL1Q9UJ83 578 aa1.76□□□□□ -2.13
CCDC93-209ENST00000488908 TRBV4-1A0A0J9YWV2 114 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 A0A1B0GTH9 108 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 IQCMA0A1B0GVH7 501 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 ARHGEF33A8MVX0 844 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 E7ENQ6 273 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 SLC1A7O00341 560 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 ZNF853P0CG23 659 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 MMP9P14780 707 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 ELK1P19419 428 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 PTPN3P26045 913 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 PKLRP30613 574 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 SRPXP78539 464 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 SIX1Q15475 284 aaPredicted RBP1.75□□□□□ -2.13
CCDC93-209ENST00000488908 PHKG1Q16816 387 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 UPP1Q16831 310 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 UGT3A2Q3SY77 523 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 SYT14P1Q58G82 188 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 AVL9Q8NBF6 648 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 MORC4Q8TE76 937 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 PGAM5Q96HS1 289 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 CMTM3Q96MX0 182 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 DGAT2Q96PD7 388 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 EBF4Q9BQW3 602 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 KCNMB3Q9NPA1 279 aa1.75□□□□□ -2.13
CCDC93-209ENST00000488908 IGHV3-16A0A0C4DH30 117 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 TRBV5-5A0A0J9YX44 114 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 LRRC72A6NJI9 287 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 ATP1B1P05026 303 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 SMIM18P0DKX4 95 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 RARGP13631 454 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 ZNF17P17021 662 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 GABRB1P18505 474 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 AADACP22760 399 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 PPARGP37231 505 aaPredicted RBP1.74□□□□□ -2.13
CCDC93-209ENST00000488908 CCR3P51677 355 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 SUOXP51687 545 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 ARSEP51690 589 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 RIDAP52758 137 aaKnown RBP1.74□□□□□ -2.13
CCDC93-209ENST00000488908 TMF1P82094 1093 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 MAT1AQ00266 395 aaKnown RBP1.74□□□□□ -2.13
CCDC93-209ENST00000488908 TRA2AQ13595 282 aaKnown RBP eCLIP1.74□□□□□ -2.13
CCDC93-209ENST00000488908 TIFABQ6ZNK6 161 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 LDB1Q86U70 411 aaPredicted RBP1.74□□□□□ -2.13
CCDC93-209ENST00000488908 MMD2Q8IY49 270 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 LGI2Q8N0V4 545 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 KIAA1524Q8TCG1 905 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 ITLN1Q8WWA0 313 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 PIGBQ92521 554 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 RTBDNQ9BSG5 229 aaPredicted RBP1.74□□□□□ -2.13
CCDC93-209ENST00000488908 TLE6Q9H808 572 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 JMJD4Q9H9V9 463 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 TBC1D17Q9HA65 648 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 PPCSQ9HAB8 311 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 PRDM4Q9UKN5 801 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 ELF5Q9UKW6 265 aaPredicted RBP1.74□□□□□ -2.13
CCDC93-209ENST00000488908 LRRFIP2Q9Y608 721 aaKnown RBP1.74□□□□□ -2.13
CCDC93-209ENST00000488908 ARID1AO14497 2285 aa1.74□□□□□ -2.13
CCDC93-209ENST00000488908 IGSF1Q8N6C5 1336 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 LNP1A1A4G5 178 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 FRMD3A2A2Y4 597 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 RPL37AP8A6NKH3 93 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 A6NLC8 198 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 MYO1GB0I1T2 1018 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 SLC33A1O00400 549 aaPredicted RBP1.73□□□□□ -2.13
CCDC93-209ENST00000488908 VILLO15195 856 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 TXNL1O43396 289 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 MITFO75030 526 aaPredicted RBP1.73□□□□□ -2.13
CCDC93-209ENST00000488908 FOXH1O75593 365 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 ACSL3O95573 720 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 DDX58O95786 925 aaKnown RBP1.73□□□□□ -2.13
CCDC93-209ENST00000488908 PYGLP06737 847 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 GIG44P09565 113 aaPredicted RBP1.73□□□□□ -2.13
CCDC93-209ENST00000488908 ALOX5P09917 674 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 UMPSP11172 480 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 MATKP42679 507 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 GSK3BP49841 420 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 DCDC1P59894 354 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 CXCL9Q07325 125 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms