RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 LCP2Q13094 533 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 TRAF3Q13114 568 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 CHIT1Q13231 466 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 KIR2DS3Q14952 304 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 NR0B2Q15466 257 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 SF1Q15637 639 aaKnown RBP5.73□□□□□ -1.49
USP39-213ENST00000467885 TBCCQ15814 346 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 CFAP157Q5JU67 520 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 PERM1Q5SV97 790 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 LIPJQ5W064 366 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 ATG9BQ674R7 924 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 FCRL6Q6DN72 434 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 ZNF425Q6IV72 752 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 LETMD1Q6P1Q0 360 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 GUSBP11Q6P575 273 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 Q6ZSR9 355 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 ASCL5Q7RTU5 278 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 LRRC70Q7Z2Q7 622 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 PIP4P1Q86T03 277 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 WDR75Q8IWA0 830 aaKnown RBP5.73□□□□□ -1.49
USP39-213ENST00000467885 TRIM48Q8IWZ4 208 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 ZNF781Q8N8C0 355 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 ARL10Q8N8L6 244 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 KYQ8NBH2 561 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 ZNF740Q8NDX6 193 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 OR4F6Q8NGB9 312 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 RHBDD1Q8TEB9 315 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 PPP4R1Q8TF05 950 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 AGAP11Q8TF27 550 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 DYDC1Q8WWB3 177 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 ZUFSPQ96AP4 578 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 PRR11Q96HE9 360 aaPredicted RBP5.73□□□□□ -1.49
USP39-213ENST00000467885 PRAP1Q96NZ9 151 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 CDK15Q96Q40 435 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 CCT8L2Q96SF2 557 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 ZNF382Q96SR6 550 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 HAUS8Q9BT25 410 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 SARGQ9BW04 601 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 ACAT2Q9BWD1 397 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 PCBD2Q9H0N5 130 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 ABCG4Q9H172 646 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 EPN3Q9H201 632 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 TUBB1Q9H4B7 451 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 NT5DC2Q9H857 520 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 MID1IP1Q9NPA3 183 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 TMEM184CQ9NVA4 438 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 ACTR10Q9NZ32 417 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 WWOXQ9NZC7 414 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 GPRC5BQ9NZH0 403 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 SEMA5BQ9P283 1151 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 PILRAQ9UKJ1 303 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 SNX7Q9UNH6 387 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 HCN4Q9Y3Q4 1203 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 CCL27Q9Y4X3 112 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 TIMM22Q9Y584 194 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 PCDHB11Q9Y5F2 797 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 KLK4Q9Y5K2 254 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 ENTPD2Q9Y5L3 495 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 DNAJC15Q9Y5T4 150 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 KCNE2Q9Y6J6 123 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 VPS13AQ96RL7 3174 aa5.73□□□□□ -1.49
USP39-213ENST00000467885 ZNF318Q5VUA4 2279 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 SERTM1A2A2V5 107 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 OR5K3A6NET4 321 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 LILRA5A6NI73 299 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 RHPN2P1A8MT19 583 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 ISM1B1AKI9 464 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 TMEM233B4DJY2 109 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 E7EQ34 232 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 AZIN1O14977 448 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 KIF1CO43896 1103 aaKnown RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 KDM1AO60341 852 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 UGDHO60701 494 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 SNUPNO95149 360 aaKnown RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 TBX6O95947 436 aaPredicted RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 OTCP00480 354 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 C9P02748 559 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 PROS1P07225 676 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 CAPN1P07384 714 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 VIMP08670 466 aaKnown RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 ALPPL2P10696 532 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 HGFP14210 728 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 UGT2B7P16662 529 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 CKMT2P17540 419 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 AMD1P17707 334 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 ACP1P24666 158 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 HRH2P25021 359 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 MPSTP25325 297 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 VARSP26640 1264 aaKnown RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 PSMB5P28074 263 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 PIK3CGP48736 1102 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 IDH3AP50213 366 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 NEK2P51955 445 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 ATXN3P54252 364 aaPredicted RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 EPHA4P54764 986 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 PPP1CAP62136 330 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 TBPL1P62380 186 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 CCL7P80098 99 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 IRF8Q02556 426 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 NHLH1Q02575 133 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms