RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ADAMTSL2Q86TH1 951 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 PAQR7Q86WK9 346 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 RELL1Q8IUW5 271 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 MCATQ8IVS2 390 aaKnown RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 ENDOVQ8N8Q3 282 aaKnown RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 TTC29Q8NA56 475 aaPredicted RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 ANKRD49Q8WVL7 239 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 EXTL1Q92935 676 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 HIST1H2AHQ96KK5 128 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 ZNF285Q96NJ3 590 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 GBP5Q96PP8 586 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 HIST1H2AJQ99878 128 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 DPH2Q9BQC3 489 aaPredicted RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 PLCD4Q9BRC7 762 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 H2AFJQ9BTM1 129 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 NDC1Q9BTX1 674 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 DERL2Q9GZP9 239 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 TSPYL1Q9H0U9 437 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 TXLNGQ9NUQ3 528 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 UTP6Q9NYH9 597 aaKnown RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 DHCR7Q9UBM7 475 aaKnown RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 NOVA2Q9UNW9 492 aaKnown RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 SH2B3Q9UQQ2 575 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 SEC16AO15027 2179 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 A0A1B0GX78 115 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 C9J4A7 227 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 CDC7O00311 574 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 NKX2-8O15522 239 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 ACSL3O95573 720 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 GUCA1CO95843 209 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 CAPN1P07384 714 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 CCND1P24385 295 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 RAB10P61026 200 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 RPS15P62841 145 aaKnown RBP12.35□□□□□ -0.43
COL5A1-206ENST00000465877 IL10RAQ13651 578 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 GRM7Q14831 915 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 NCF4Q15080 339 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 TSNQ15631 228 aaKnown RBP12.35□□□□□ -0.43
COL5A1-206ENST00000465877 SOWAHCQ53LP3 525 aaPredicted RBP12.35□□□□□ -0.43
COL5A1-206ENST00000465877 GRTP1Q5TC63 336 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 C1orf189Q5VU69 101 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 LCN10Q6JVE6 187 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 C16orf46Q6P387 395 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 FRA10AC1Q70Z53 315 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 CMC1Q7Z7K0 106 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 LRRN4CLQ8ND94 238 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 ANKRD7Q92527 254 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 ALKBH8Q96BT7 664 aaKnown RBP12.35□□□□□ -0.43
COL5A1-206ENST00000465877 FBXL8Q96CD0 374 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 CATSPER2Q96P56 530 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 SGPP1Q9BX95 441 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 GPR87Q9BY21 358 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 TRIM54Q9BYV2 358 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 UNKQ9C0B0 810 aaKnown RBP12.35□□□□□ -0.43
COL5A1-206ENST00000465877 PCBD2Q9H0N5 130 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 ATG10Q9H0Y0 220 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 ACSS3Q9H6R3 686 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 SYNPO2LQ9H987 977 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 ENAMQ9NRM1 1142 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 STARD5Q9NSY2 213 aa12.35□□□□□ -0.43
COL5A1-206ENST00000465877 TLN1Q9Y490 2541 aaKnown RBP12.34□□□□□ -0.43
COL5A1-206ENST00000465877 LOC105369274A0A096LPK9 316 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 LOC102723532A0A0G2JNH3 316 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 HAT1O14929 419 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 CREG1O75629 220 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 RAB40ALP0C0E4 278 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 RHOXF2BP0C7M4 288 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 AGXTP21549 392 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 PTPN4P29074 926 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 ARSFP54793 590 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 NFKB2Q00653 900 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 NAE1Q13564 534 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 BMPR2Q13873 1038 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 UAP1Q16222 522 aaPredicted RBP12.34□□□□□ -0.43
COL5A1-206ENST00000465877 ZXDCQ2QGD7 858 aaPredicted RBP12.34□□□□□ -0.43
COL5A1-206ENST00000465877 YOD1Q5VVQ6 348 aaPredicted RBP12.34□□□□□ -0.43
COL5A1-206ENST00000465877 CAPN13Q6MZZ7 669 aaPredicted RBP12.34□□□□□ -0.43
COL5A1-206ENST00000465877 BORAQ6PGQ7 559 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 LCTLQ6UWM7 567 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 TTLL10Q6ZVT0 673 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 SYVN1Q86TM6 617 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 OR4N4Q8N0Y3 316 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 OR56A3Q8NH54 315 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 ATL1Q8WXF7 558 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 PYCR2Q96C36 320 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 MRRFQ96E11 262 aaKnown RBP12.34□□□□□ -0.43
COL5A1-206ENST00000465877 CYTH2Q99418 400 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 C17orf62Q9BQA9 187 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 RHOXF2Q9BQY4 288 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 FUT8Q9BYC5 575 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 NLNQ9BYT8 704 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 FAM117AQ9C073 453 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 L2HGDHQ9H9P8 463 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 CUTCQ9NTM9 273 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 CTNNAL1Q9UBT7 734 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 NFU1Q9UMS0 254 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 SNX7Q9UNH6 387 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 OARD1Q9Y530 152 aa12.34□□□□□ -0.43
COL5A1-206ENST00000465877 CDC14CA4D256 554 aa12.33□□□□□ -0.44
COL5A1-206ENST00000465877 FITM1A5D6W6 292 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms