RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TMEM247A6NEH6 219 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 ANKUB1A6NFN9 424 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 ASB14A6NK59 587 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 ARHGEF9O43307 516 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 ZNF208O43345 1280 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 GRID2O43424 1007 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 PRAF2O60831 178 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 MMP10P09238 476 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 RFPL3SP0C7P2 107 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 NR2F6P10588 404 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 APEHP13798 732 aaKnown RBP4.75□□□□□ -1.65
GABPB1-204ENST00000396464 CEBPBP17676 345 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 TGM2P21980 687 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 ITGA3P26006 1051 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 CTNNA2P26232 953 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 U2AF2P26368 475 aaKnown RBP eCLIP4.75□□□□□ -1.65
GABPB1-204ENST00000396464 ITPKBP27987 946 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 DLSTP36957 453 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 SYKP43405 635 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 SLC1A6P48664 564 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 FMO5P49326 533 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 RGS4P49798 205 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 VAV2P52735 878 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 RABGGTBP53611 331 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 MTCP1P56278 107 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 SUMO2P61956 95 aaKnown RBP4.75□□□□□ -1.65
GABPB1-204ENST00000396464 MRPS21P82921 87 aaKnown RBP4.75□□□□□ -1.65
GABPB1-204ENST00000396464 E2F1Q01094 437 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 ROR2Q01974 943 aaKnown RBP4.75□□□□□ -1.65
GABPB1-204ENST00000396464 IL18Q14116 193 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 GK2Q14410 553 aaPredicted RBP4.75□□□□□ -1.65
GABPB1-204ENST00000396464 CNGA3Q16281 694 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 SGO1Q5FBB7 561 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 RABGAP1LQ5R372 815 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 METRNLQ641Q3 311 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 ERICH5Q6P6B1 374 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 BTNL8Q6UX41 500 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 ZC3HC1Q86WB0 502 aaKnown RBP4.75□□□□□ -1.65
GABPB1-204ENST00000396464 VRK3Q8IV63 474 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 UBE2J2Q8N2K1 259 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 GJC3Q8NFK1 279 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 MDGA1Q8NFP4 955 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 CMASQ8NFW8 434 aaPredicted RBP4.75□□□□□ -1.65
GABPB1-204ENST00000396464 MOB3AQ96BX8 217 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 ULK4Q96C45 1275 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 RASL10BQ96S79 203 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 COQ7Q99807 217 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 CPPED1Q9BRF8 314 aaPredicted RBP4.75□□□□□ -1.65
GABPB1-204ENST00000396464 C11orf70Q9BRQ4 267 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 LLPHQ9BRT6 129 aaKnown RBP4.75□□□□□ -1.65
GABPB1-204ENST00000396464 PCGF1Q9BSM1 259 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 RNF26Q9BY78 433 aaPredicted RBP4.75□□□□□ -1.65
GABPB1-204ENST00000396464 MRPL13Q9BYD1 178 aaKnown RBP4.75□□□□□ -1.65
GABPB1-204ENST00000396464 TPSD1Q9BZJ3 242 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 MAGT1Q9H0U3 335 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 MVB12BQ9H7P6 319 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 CATSPERBQ9H7T0 1116 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 MED20Q9H944 212 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 HHATLQ9HCP6 504 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 TXNRD2Q9NNW7 524 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 LZTFL1Q9NQ48 299 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 SERGEFQ9UGK8 458 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 CRLS1Q9UJA2 301 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 KCNJ14Q9UNX9 436 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 FZD1Q9UP38 647 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 CHMP2BQ9UQN3 213 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 SH3GLB1Q9Y371 365 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 HEG1Q9ULI3 1381 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 SPATA31A1Q5TZJ5 1347 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 SPATA31A5Q5VU36 1347 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 SPATA31A7Q8IWB4 1347 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 A0A0U1RQF3 1178 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 A0A1B0GTW7 788 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 PIPSLA2A3N6 862 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 BTBD17A6NE02 478 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 OR2AG2A6NM03 316 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 A8MUI8 341 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 BECN2A8MW95 431 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 FAM157AC9JC47 383 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 LUC7L3O95232 432 aaKnown RBP4.74□□□□□ -1.65
GABPB1-204ENST00000396464 TROVE2P10155 538 aaKnown RBP eCLIP4.74□□□□□ -1.65
GABPB1-204ENST00000396464 S1PR1P21453 382 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 MPZP25189 248 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 PIK3R1P27986 724 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 PPP2R1AP30153 589 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 LHX1P48742 406 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 CLCN5P51795 746 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 MAP3K7CLP57077 242 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 RPS7P62081 194 aaKnown RBP4.74□□□□□ -1.65
GABPB1-204ENST00000396464 RPL23AP62750 156 aaKnown RBP4.74□□□□□ -1.65
GABPB1-204ENST00000396464 DLK1P80370 383 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 CDK3Q00526 305 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 CNTN2Q02246 1040 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 FPGSQ05932 587 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 CARTPTQ16568 116 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 TMEM268Q5VZI3 342 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 CARD17Q5XLA6 110 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 KIAA1161Q6NSJ0 714 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 DEGS2Q6QHC5 323 aa4.74□□□□□ -1.65
GABPB1-204ENST00000396464 PQLC2Q6ZP29 291 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms