RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 TM9SF3Q9HD45 589 aa17.52■□□□□ 0.4
CD40-201ENST00000372276 SIRT5Q9NXA8 310 aa17.52■□□□□ 0.4
CD40-201ENST00000372276 CD84Q9UIB8 345 aa17.52■□□□□ 0.4
CD40-201ENST00000372276 PPT2Q9UMR5 302 aa17.52■□□□□ 0.4
CD40-201ENST00000372276 KCNE2Q9Y6J6 123 aa17.52■□□□□ 0.4
CD40-201ENST00000372276 CLIC1O00299 241 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 RHOP08100 348 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 ITGAMP11215 1152 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 ITPKAP23677 461 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 EEF1B2P24534 225 aaKnown RBP17.51■□□□□ 0.39
CD40-201ENST00000372276 HPCAL1P37235 193 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 DCTP40126 519 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 UBE3AQ05086 875 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 ZXDCQ2QGD7 858 aaPredicted RBP17.51■□□□□ 0.39
CD40-201ENST00000372276 DOK6Q6PKX4 331 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 DNAJC14Q6Y2X3 702 aaPredicted RBP17.51■□□□□ 0.39
CD40-201ENST00000372276 ARHGAP22Q7Z5H3 698 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 SLC22A15Q8IZD6 547 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 NETO1Q8TDF5 533 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 ZNF514Q96K75 400 aaPredicted RBP17.51■□□□□ 0.39
CD40-201ENST00000372276 PANX1Q96RD7 426 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 C11orf49Q9H6J7 331 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 TLR9Q9NR96 1032 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 RWDD3Q9Y3V2 267 aa17.51■□□□□ 0.39
CD40-201ENST00000372276 TRIM64BA6NI03 449 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 ARHGEF33A8MVX0 844 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 MAGEB17A8MXT2 336 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 MOSPD3O75425 235 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 PRNPP04156 253 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 ABCB1P08183 1280 aaPredicted RBP17.5■□□□□ 0.39
CD40-201ENST00000372276 ELFN1P0C7U0 828 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 LINC00271P0C7V0 271 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 COX7A2P14406 83 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 GSTM2P28161 218 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 MMP12P39900 470 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 ETV3P41162 512 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 RGS19P49795 217 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 DOC2AQ14183 400 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 RAB39AQ14964 217 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 PLCL1Q15111 1095 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 VMACQ2NL98 169 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 BCL7AQ4VC05 210 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 SERPINA13PQ6UXR4 307 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 TMEM26Q6ZUK4 368 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 ZDHHC21Q8IVQ6 265 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 PHACTR4Q8IZ21 702 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 SCAMP4Q969E2 229 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 PYCR2Q96C36 320 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 C12orf43Q96C57 262 aaKnown RBP17.5■□□□□ 0.39
CD40-201ENST00000372276 INPP5KQ9BT40 448 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 ATG10Q9H0Y0 220 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 ABCG8Q9H221 673 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 IL1RAPQ9NPH3 570 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 STOX2Q9P2F5 926 aaPredicted RBP17.5■□□□□ 0.39
CD40-201ENST00000372276 MRPS14O60783 128 aaKnown RBP17.5■□□□□ 0.39
CD40-201ENST00000372276 CLIC3O95833 236 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 CCDC159P0C7I6 412 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 CDK4P11802 303 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 SYN1P17600 705 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 CRHBPP24387 322 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 TACR1P25103 407 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 PCSK6P29122 969 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 WEE1P30291 646 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 ELP6Q0PNE2 266 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 TMEM115Q12893 351 aaPredicted RBP17.5■□□□□ 0.39
CD40-201ENST00000372276 PMS2P3Q13401 168 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 LAPTM5Q13571 262 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 ZIK1Q3SY52 487 aaPredicted RBP17.5■□□□□ 0.39
CD40-201ENST00000372276 GTDC1Q4AE62 458 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 PAGE2BQ5JRK9 111 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 C6orf141Q5SZD1 244 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 OR4F3Q6IEY1 312 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 SPESP1Q6UW49 350 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 UBE2Q1Q7Z7E8 422 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 NLRP8Q86W28 1048 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 NUDT8Q8WV74 236 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 ZNF566Q969W8 418 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 AP2M1Q96CW1 435 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 REXO4Q9GZR2 422 aaKnown RBP17.5■□□□□ 0.39
CD40-201ENST00000372276 CARS2Q9HA77 564 aaKnown RBP17.5■□□□□ 0.39
CD40-201ENST00000372276 PLGRKTQ9HBL7 147 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 SLC27A6Q9Y2P4 619 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 PCDHB11Q9Y5F2 797 aa17.5■□□□□ 0.39
CD40-201ENST00000372276 LOC100130705A0A1B0GUX0 176 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 TTC34A8MYJ7 566 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 FKBP9O95302 570 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 NAE1Q13564 534 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 ELOAQ14241 798 aaKnown RBP17.49■□□□□ 0.39
CD40-201ENST00000372276 NKG7Q16617 165 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 HIST2H2ACQ16777 129 aaPredicted RBP17.49■□□□□ 0.39
CD40-201ENST00000372276 LRRC23Q53EV4 343 aaPredicted RBP17.49■□□□□ 0.39
CD40-201ENST00000372276 HIST2H2AA3Q6FI13 130 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 OR2T5Q6IEZ7 315 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 CAPN13Q6MZZ7 669 aaPredicted RBP17.49■□□□□ 0.39
CD40-201ENST00000372276 CES5AQ6NT32 575 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 LIPIQ6XZB0 460 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 EIF3MQ7L2H7 374 aaKnown RBP17.49■□□□□ 0.39
CD40-201ENST00000372276 PIWIL3Q7Z3Z3 882 aaKnown RBP17.49■□□□□ 0.39
CD40-201ENST00000372276 FAM86B1Q8N7N1 296 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 OR13F1Q8NGS4 319 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms