RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 STYXQ8WUJ0 223 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 MYH15Q9Y2K3 1946 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 ROBO2Q9HCK4 1378 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 ISPDA4D126 451 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 DHPSP49366 369 aaPredicted RBP16.02■□□□□ 0.16
PTCH1-201ENST00000331920 BCL2A1Q16548 175 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.02■□□□□ 0.16
PTCH1-201ENST00000331920 ZPBP2Q6X784 338 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 RPL36Q9Y3U8 105 aaKnown RBP16.02■□□□□ 0.16
PTCH1-201ENST00000331920 OR4F21O95013 312 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 MRPS5P82675 430 aaKnown RBP16.02■□□□□ 0.16
PTCH1-201ENST00000331920 OTOP2Q7RTS6 562 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 CYP2U1Q7Z449 544 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 FTHL17Q9BXU8 183 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 LRFN1Q9P244 771 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 HEBP2Q9Y5Z4 205 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 ACTL6BO94805 426 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 HNF1BP35680 557 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 MARCKSL1P49006 195 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 FIGNQ5HY92 759 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 BBS12Q6ZW61 710 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 SERPINA9Q86WD7 417 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 PRR18Q8N4B5 295 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 PHOSPHO1Q8TCT1 267 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 CMKLR1Q99788 373 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 RHOJQ9H4E5 214 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 TMX2Q9Y320 296 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 TGDSO95455 350 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 MRPL3P09001 348 aaKnown RBP16.02■□□□□ 0.15
PTCH1-201ENST00000331920 DCST2Q5T1A1 773 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 ENPP7Q6UWV6 458 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 HMGB4Q8WW32 186 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 FCAMRQ8WWV6 532 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 AZIN2Q96A70 460 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 AGAP5A6NIR3 686 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 HTR1AP08908 422 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 SYT16Q17RD7 645 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 POLLQ9UGP5 575 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 PNPLA6Q8IY17 1366 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 TULP2O00295 520 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 PIP5K1BO14986 540 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 CYP1A2P05177 515 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 BPGMP07738 259 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 GBE1Q04446 702 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 QPCTQ16769 361 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 NAPRTQ6XQN6 538 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 PSKH2Q96QS6 385 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 PDCD2LQ9BRP1 358 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 CMAHPQ9Y471 501 aa16.02■□□□□ 0.15
PTCH1-201ENST00000331920 SRRM3A6NNA2 597 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-201ENST00000331920 DLDP09622 509 aaKnown RBP16.01■□□□□ 0.15
PTCH1-201ENST00000331920 GTF2F2P13984 249 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 CRHR1P34998 444 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 MATKP42679 507 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 TAF10Q12962 218 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 SEC23BQ15437 767 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 ZC3H14Q6PJT7 736 aaKnown RBP16.01■□□□□ 0.15
PTCH1-201ENST00000331920 TMPPEQ6ZT21 453 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 ESX1Q8N693 406 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 B3GNT5Q9BYG0 378 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 TPT1P8Q9HAU6 139 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 HSPB11Q9Y547 144 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 XPNPEP2O43895 674 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 CCINQ13939 588 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 LRRC32Q14392 662 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 SDSLQ96GA7 329 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 CENPNQ96H22 339 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-201ENST00000331920 CNTNAP1P78357 1384 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 CSF2P04141 144 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 GSTM2P28161 218 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 CCR8P51685 355 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 RIDAP52758 137 aaKnown RBP16.01■□□□□ 0.15
PTCH1-201ENST00000331920 ABRAXAS2Q15018 415 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 P2RX7Q99572 595 aaKnown RBP16.01■□□□□ 0.15
PTCH1-201ENST00000331920 TMEM246Q9BRR3 403 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 MUC13Q9H3R2 512 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 ZNF282Q9UDV7 671 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-201ENST00000331920 A0A1W2PPK0 400 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 ZNF850A8MQ14 1090 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 C11orf98E9PRG8 122 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 ABLIM1O14639 778 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 TSPAN15O95858 294 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 GOT2P00505 430 aaKnown RBP16.01■□□□□ 0.15
PTCH1-201ENST00000331920 BCHEP06276 602 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 DSC2Q02487 901 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 ARHGAP40Q5TG30 622 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 DCLRE1AQ6PJP8 1040 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 PLLPQ9Y342 182 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 PLD2O14939 933 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 GSTT2P0CG29 244 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 CCNHP51946 323 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-201ENST00000331920 CRISP3P54108 245 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 TMEM151BQ8IW70 566 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 MSLNLQ96KJ4 702 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 NMUR2Q9GZQ4 415 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 TMPRSS11EQ9UL52 423 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 ANKRD34BA5PLL1 514 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 TOXO94900 526 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 NTRK2Q16620 822 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 METTL27Q8N6F8 245 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms