RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 SNX1Q13596 522 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 TSTA3Q13630 321 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-203ENST00000546881 NAA30Q147X3 362 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-203ENST00000546881 CCSMST1Q4G0I0 132 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 B3GNTL1Q67FW5 361 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-203ENST00000546881 CNSTQ6PJW8 725 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 IGFL2Q6UWQ7 119 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 OTOAQ7RTW8 1153 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 FJX1Q86VR8 437 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 OR1N1Q8NGS0 311 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 STT3BQ8TCJ2 826 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 C1orf54Q8WWF1 131 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 ZUFSPQ96AP4 578 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 RAD51AP1Q96B01 352 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 TRIM44Q96DX7 344 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-203ENST00000546881 PANX3Q96QZ0 392 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 CHRAC1Q9NRG0 131 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 OLAHQ9NV23 265 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 PTGFRNQ9P2B2 879 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 ZNF282Q9UDV7 671 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-203ENST00000546881 GNPTGQ9UJJ9 305 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 C3orf18Q9UK00 162 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 RIMKLBQ9ULI2 386 aa10.96□□□□□ -0.65
RAB5C-203ENST00000546881 CREBBPQ92793 2442 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 LOC105369274A0A096LPK9 316 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 NSG1A0A0A6YYJ2 146 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 LOC102723532A0A0G2JNH3 316 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 FITM1A5D6W6 292 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 VSTM2BA6NLU5 285 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 TARM1B6A8C7 271 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 FFAR3O14843 346 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 CD3EAPO15446 510 aaKnown RBP10.95□□□□□ -0.66
RAB5C-203ENST00000546881 GPR42O15529 346 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 LIASO43766 372 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 SRPX2O60687 465 aaPredicted RBP10.95□□□□□ -0.66
RAB5C-203ENST00000546881 NDUFS3O75489 264 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 SLCO2B1O94956 709 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 MED26O95402 600 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 C1orf105O95561 183 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 HPP00738 406 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 F10P00742 488 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 ZGLP1P0C6A0 271 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 TNFRSF8P28908 595 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 STIP1P31948 543 aaKnown RBP10.95□□□□□ -0.66
RAB5C-203ENST00000546881 TTPAP49638 278 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 EIF3BP55884 814 aaKnown RBP10.95□□□□□ -0.66
RAB5C-203ENST00000546881 CRADDP78560 199 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 ACVR1Q04771 509 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 EEF1A2Q05639 463 aaKnown RBP10.95□□□□□ -0.66
RAB5C-203ENST00000546881 MFAP5Q13361 173 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 ZRSR2Q15696 482 aaKnown RBP10.95□□□□□ -0.66
RAB5C-203ENST00000546881 VWA2Q5GFL6 755 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 FAAH2Q6GMR7 532 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 KBTBD2Q8IY47 623 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 OR4N4Q8N0Y3 316 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 BCORP1Q8N888 145 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 CCDC89Q8N998 374 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 OR2L3Q8NG85 312 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 MARVELD3Q96A59 401 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 FAM136AQ96C01 138 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 PBKQ96KB5 322 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 CABS1Q96KC9 395 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 FOPNLQ96NB1 174 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 ZNF285Q96NJ3 590 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 ACAT2Q9BWD1 397 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 FRMD8P1Q9BZ68 369 aaPredicted RBP10.95□□□□□ -0.66
RAB5C-203ENST00000546881 PLA2G3Q9NZ20 509 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 ZKSCAN5Q9Y2L8 839 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 MDC1Q14676 2089 aaKnown RBP10.95□□□□□ -0.66
RAB5C-203ENST00000546881 CENPEQ02224 2701 aa10.95□□□□□ -0.66
RAB5C-203ENST00000546881 ANKRD12Q6UB98 2062 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 DYTNA2CJ06 578 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 PRSS44E7EML9 344 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 KPNA5O15131 536 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 PRICKLE3O43900 615 aaPredicted RBP10.94□□□□□ -0.66
RAB5C-203ENST00000546881 JRKO75564 520 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 FKBP9O95302 570 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 CXCR2P25025 360 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 CMPK1P30085 196 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 KCNK10P57789 538 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 YBX1P67809 324 aaKnown RBP10.94□□□□□ -0.66
RAB5C-203ENST00000546881 FASTKQ14296 549 aaKnown RBP10.94□□□□□ -0.66
RAB5C-203ENST00000546881 MUM1Q2TAK8 710 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 PCID2Q5JVF3 399 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 PRMT9Q6P2P2 845 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 GSTA5Q7RTV2 222 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 TICAM1Q8IUC6 712 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 SLC34A3Q8N130 599 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 SIRT6Q8N6T7 355 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 BRIX1Q8TDN6 353 aaKnown RBP10.94□□□□□ -0.66
RAB5C-203ENST00000546881 LMF1Q96S06 567 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 NAP1L3Q99457 506 aaPredicted RBP10.94□□□□□ -0.66
RAB5C-203ENST00000546881 DPH7Q9BTV6 452 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.94□□□□□ -0.66
RAB5C-203ENST00000546881 ABCF3Q9NUQ8 709 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 TRPC4Q9UBN4 977 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 MRFAP1Q9Y605 127 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 ITPR2Q14571 2701 aa10.94□□□□□ -0.66
RAB5C-203ENST00000546881 DOCK10Q96BY6 2186 aa10.93□□□□□ -0.66
RAB5C-203ENST00000546881 A0A1B0GUH1 482 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms