RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 C1GALT1C1LP0DN25 315 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 KITP10721 976 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 CXCR2P25025 360 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 ADSLP30566 484 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-208ENST00000469529 KRT6CP48668 564 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 FOXA1P55317 472 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 IRF8Q02556 426 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 DOC2AQ14183 400 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 FASTKQ14296 549 aaKnown RBP12.31□□□□□ -0.44
TRAF4-208ENST00000469529 KIR2DS3Q14952 304 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 SHBQ15464 509 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 LPAL2Q16609 132 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 XKR7Q5GH72 579 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 PRAMEF14Q5SWL7 426 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 PRAMEF13Q5VWM6 474 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 GRHL2Q6ISB3 625 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 DUS1LQ6P1R4 473 aaKnown RBP12.31□□□□□ -0.44
TRAF4-208ENST00000469529 LAYNQ6UX15 382 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 TMEM26Q6ZUK4 368 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 FAM129CQ86XR2 697 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 PARP9Q8IXQ6 854 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 LAS2Q8IYD9 372 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 ADGRF3Q8IZF5 1079 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 ARL14Q8N4G2 192 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 SNX31Q8N9S9 440 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 LMNTD1Q8N9Z9 388 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 SLC37A2Q8TED4 501 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 SLC5A11Q8WWX8 675 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 LCN9Q8WX39 176 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 PIGKQ92643 395 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 NEIL2Q969S2 332 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 UBE2E3Q969T4 207 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 SHCBP1LQ9BZQ2 653 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 MYLK2Q9H1R3 596 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 TUBB1Q9H4B7 451 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 RABEP2Q9H5N1 569 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 ADGRE2Q9UHX3 823 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 SNX6Q9UNH7 406 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 RNF11Q9Y3C5 154 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 DYRK1BQ9Y463 629 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 PCDHGA11Q9Y5H2 935 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 GPR179Q6PRD1 2367 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 GVINP1Q7Z2Y8 2422 aa12.31□□□□□ -0.44
TRAF4-208ENST00000469529 KRT87PA6NCN2 255 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 TMEM233B4DJY2 109 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 MANBAO00462 879 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 SLC22A2O15244 555 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 TNFSF14O43557 240 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 CCDC22O60826 627 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 EPN2O95208 641 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 CCNDBP1O95273 360 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 SERPINA6P08185 405 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 SYPP08247 313 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 HSD3B1P14060 373 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 PRPH2P23942 346 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 HSD3B2P26439 372 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 MRPL19P49406 292 aaKnown RBP12.3□□□□□ -0.44
TRAF4-208ENST00000469529 GRIK2Q13002 908 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 SLC9B1Q4ZJI4 515 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 XKR6Q5GH73 641 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 PAGE2BQ5JRK9 111 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 CLEC6AQ6EIG7 209 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 LAIR1Q6GTX8 287 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 OGFOD2Q6N063 350 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 Q6ZSR9 355 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 ACAD11Q709F0 780 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 CHSY3Q70JA7 882 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 TRIM48Q8IWZ4 208 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 CPSF7Q8N684 471 aaKnown RBP12.3□□□□□ -0.44
TRAF4-208ENST00000469529 CDYL2Q8N8U2 506 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 GBP7Q8N8V2 638 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-208ENST00000469529 PPFIBP2Q8ND30 876 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 WDR20Q8TBZ3 569 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 SAP25Q8TEE9 199 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 TWIST2Q8WVJ9 160 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 MED8Q96G25 268 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 IL17FQ96PD4 163 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 EBF4Q9BQW3 602 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 DUSP23Q9BVJ7 150 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 NUF2Q9BZD4 464 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 SRMSQ9H3Y6 488 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 TCF7L2Q9NQB0 619 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 TMEM184CQ9NVA4 438 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 TMEM45AQ9NWC5 275 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 HEY2Q9UBP5 337 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 CCL27Q9Y4X3 112 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 EML5Q05BV3 1969 aa12.3□□□□□ -0.44
TRAF4-208ENST00000469529 GON4LQ3T8J9 2241 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 PRAMEF33A0A0G2JMD5 474 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 LILRA5A6NI73 299 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 SLC28A1O00337 649 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 FOXE1O00358 373 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-208ENST00000469529 EBAG9O00559 213 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 ARHGAP33O14559 1287 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 NUDT21O43809 227 aaKnown RBP12.29□□□□□ -0.44
TRAF4-208ENST00000469529 PCDHGA12O60330 932 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 CRCPO75575 148 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 CHRM5P08912 532 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-208ENST00000469529 ZNF883P0CG24 379 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 CD22P20273 847 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms