RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 CFAP46Q8IYW2 2715 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 IGKV1-8A0A0C4DH67 115 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 OR2A25A4D2G3 310 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 NPEPPSL1A6NEC2 478 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 TARM1B6A8C7 271 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 C21orf140B9A014 251 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 CTSVO60911 334 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 ENO2P09104 434 aaPredicted RBP12.38□□□□□ -0.43
COL5A1-206ENST00000465877 HBQ1P09105 142 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 TCN2P20062 427 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 SLC12A2P55011 1212 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 CDC20Q12834 499 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 PPP1R3AQ16821 1122 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 THEMIS2Q5TEJ8 643 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 PRAMEF13Q5VWM6 474 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 ZNF385CQ66K41 422 aaPredicted RBP12.38□□□□□ -0.43
COL5A1-206ENST00000465877 FAM199XQ6PEV8 388 aaPredicted RBP12.38□□□□□ -0.43
COL5A1-206ENST00000465877 FAM198BQ6UWH4 519 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 TMEM207Q6UWW9 146 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 ZNF517Q6ZMY9 492 aaPredicted RBP12.38□□□□□ -0.43
COL5A1-206ENST00000465877 CEP128Q6ZU80 1094 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 NKAPQ8N5F7 415 aaKnown RBP12.38□□□□□ -0.43
COL5A1-206ENST00000465877 PPM1NQ8N819 430 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 MCOLN3Q8TDD5 553 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 TTC9Q92623 222 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 MR1Q95460 341 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 ZUFSPQ96AP4 578 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 PDLIM5Q96HC4 596 aaKnown RBP12.38□□□□□ -0.43
COL5A1-206ENST00000465877 CCDC138Q96M89 665 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 BBC3Q96PG8 261 aaPredicted RBP12.38□□□□□ -0.43
COL5A1-206ENST00000465877 RUFY1Q96T51 708 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 SELENOSQ9BQE4 189 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 DPH7Q9BTV6 452 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 CDC42EP4Q9H3Q1 356 aaKnown RBP12.38□□□□□ -0.43
COL5A1-206ENST00000465877 AKIRIN1Q9H9L7 192 aaPredicted RBP12.38□□□□□ -0.43
COL5A1-206ENST00000465877 CAB39LQ9H9S4 337 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 PARVBQ9HBI1 364 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 GPAMQ9HCL2 828 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 NINJ2Q9NZG7 142 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 ANKMY1Q9P2S6 941 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 KCND3Q9UK17 655 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 SRPK3Q9UPE1 567 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 PCDHGA6Q9Y5G7 932 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 AP1M2Q9Y6Q5 423 aa12.38□□□□□ -0.43
COL5A1-206ENST00000465877 MEN1O00255 615 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 ATXN7O15265 892 aaPredicted RBP12.37□□□□□ -0.43
COL5A1-206ENST00000465877 PHGDHO43175 533 aaKnown RBP12.37□□□□□ -0.43
COL5A1-206ENST00000465877 WISP3O95389 354 aaPredicted RBP12.37□□□□□ -0.43
COL5A1-206ENST00000465877 ITGB2P05107 769 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 PRKAR1AP10644 381 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 GCGRP47871 477 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 AP1S2P56377 157 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 POU4F1Q01851 419 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 COL9A2Q14055 689 aaPredicted RBP12.37□□□□□ -0.43
COL5A1-206ENST00000465877 SLMAPQ14BN4 828 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 PTCHD3Q3KNS1 767 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 ZC3H12BQ5HYM0 836 aaKnown RBP12.37□□□□□ -0.43
COL5A1-206ENST00000465877 UBAP2Q5T6F2 1119 aaKnown RBP12.37□□□□□ -0.43
COL5A1-206ENST00000465877 RHBDD2Q6NTF9 364 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 TLDC1Q6P9B6 456 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 AGTRAPQ6RW13 159 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 PCSK4Q6UW60 755 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 ZNF655Q8N720 491 aaPredicted RBP12.37□□□□□ -0.43
COL5A1-206ENST00000465877 PROKR1Q8TCW9 393 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 IFT81Q8WYA0 676 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 TSPAN17Q96FV3 270 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 MED8Q96G25 268 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 ZFYVE21Q9BQ24 234 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 SPRTNQ9H040 489 aaPredicted RBP12.37□□□□□ -0.43
COL5A1-206ENST00000465877 CHST8Q9H2A9 424 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 ACTL8Q9H568 366 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 CUEDC1Q9NWM3 386 aaPredicted RBP12.37□□□□□ -0.43
COL5A1-206ENST00000465877 ARL15Q9NXU5 204 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 IKZF3Q9UKT9 509 aa12.37□□□□□ -0.43
COL5A1-206ENST00000465877 MTO1Q9Y2Z2 717 aaKnown RBP12.37□□□□□ -0.43
COL5A1-206ENST00000465877 PCSK5Q92824 1860 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 A0A0J9YVX5 310 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 KATNA1O75449 491 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 FAM155BO75949 473 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 KLK3P07288 261 aaPredicted RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 HIST1H2AGP0C0S8 130 aaPredicted RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 EZRP15311 586 aaKnown RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 STMN1P16949 149 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 HIST1H2ADP20671 130 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 PHBP35232 272 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 SPRP35270 261 aaPredicted RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 VSX2P58304 361 aaPredicted RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 RPS18P62269 152 aaKnown RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 ABATP80404 500 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 MC1RQ01726 317 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 PRDX1Q06830 199 aaKnown RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 USP10Q14694 798 aaKnown RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 ZKSCAN8Q15776 578 aaPredicted RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 CRTC2Q53ET0 693 aaPredicted RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 TAF1BQ53T94 588 aaPredicted RBP12.36□□□□□ -0.43
COL5A1-206ENST00000465877 TCTE1Q5JU00 501 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 ATP1A1-AS1Q5TC04 95 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 FRMPD2BQ6IN97 320 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 ZNF425Q6IV72 752 aa12.36□□□□□ -0.43
COL5A1-206ENST00000465877 ADCK2Q7Z695 626 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms