RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 RNF32Q9H0A6 362 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ZMYND12Q9H0C1 365 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 METTL8Q9H825 291 aaKnown RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ENTPD7Q9NQZ7 604 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 TLR9Q9NR96 1032 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 RGS18Q9NS28 235 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 RBM12Q9NTZ6 932 aaKnown RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 TEX10Q9NXF1 929 aaPredicted RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 PLA2G2EQ9NZK7 142 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 TUBE1Q9UJT0 475 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ADAM28Q9UKQ2 775 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ACSL5Q9ULC5 683 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ERVW-1Q9UQF0 538 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 PCDHA11Q9Y5I1 949 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 RBM8AQ9Y5S9 174 aaKnown RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 NUBP2Q9Y5Y2 271 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 CDY2AQ9Y6F7 541 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 MED23Q9ULK4 1368 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 STK36Q9NRP7 1315 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 C2orf71A6NGG8 1288 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 DUXAA6NLW8 204 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 AGAP14A8MT82 685 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 HACD1B0YJ81 288 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 SUPT3HB4E1H0 165 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 M0QYV0 167 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 O00370 1275 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 PSMA7O14818 248 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 LRRTM2O43300 516 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 SCN2BO60939 215 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ZWINTO95229 277 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 TNFRSF6BO95407 300 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 IFNA4P05014 189 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ALPPP05187 535 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 THBS1P07996 1170 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 SAGP10523 405 aaPredicted RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ALPPL2P10696 532 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF10P21506 573 aaPredicted RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 YWHAQP27348 245 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 AHRP35869 848 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 FEN1P39748 380 aaKnown RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 LSSP48449 732 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 OAZ1P54368 228 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 NME5P56597 212 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 RBX1P62877 108 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 FOXM1Q08050 763 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ALCAMQ13740 583 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 SELPLGQ14242 412 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 SF1Q15637 639 aaKnown RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 TOMM34Q15785 309 aaPredicted RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 SLC35G1Q2M3R5 365 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 AP5B1Q2VPB7 878 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 AKIRIN2Q53H80 203 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 PAPD7Q5XG87 772 aaKnown RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 RPL13AP3Q6NVV1 102 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 SYCE2Q6PIF2 218 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 TMIGD1Q6UXZ0 262 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 LIPIQ6XZB0 460 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 TMEM26Q6ZUK4 368 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 Q6ZVU0 165 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 USP30Q70CQ3 517 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ADGRD2Q7Z7M1 963 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 PRPF39Q86UA1 669 aaKnown RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ZDHHC13Q8IUH4 622 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 DHX40Q8IX18 779 aaKnown RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ENTHD1Q8IYW4 607 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 CDK20Q8IZL9 346 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 CMTR1Q8N1G2 835 aaKnown RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 GPR137CQ8N3F9 429 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 SLC15A4Q8N697 577 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 C17orf47Q8NEP4 570 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ACTL9Q8TC94 416 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 HSD17B8Q92506 261 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 PHYHIPQ92561 330 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 EDAQ92838 391 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 MRPL38Q96DV4 380 aaKnown RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 CMTM5Q96DZ9 223 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 C2orf88Q9BSF0 95 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 KAT8Q9H7Z6 458 aaKnown RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF302Q9NR11 478 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ZCCHC3Q9NUD5 404 aaKnown RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 MYEF2Q9P2K5 600 aaKnown RBP4.85□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF225Q9UK10 706 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 SAR1BQ9Y6B6 198 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 PIK3C2AO00443 1686 aa4.85□□□□□ -1.63
EPHA3-202ENST00000452448 PITPNM2Q9BZ72 1349 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 MYH7P12883 1935 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 EDDM13A0A1B0GTR0 161 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 METTL12A8MUP2 240 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 PRR23D1E9PI22 279 aaPredicted RBP4.84□□□□□ -1.63
EPHA3-202ENST00000452448 NPIPA2E9PIF3 369 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 UBE2Q2LH0YL09 131 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 H3BSA7 217 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 J3QRK9 145 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 MAGEB2O15479 319 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 RGS5O15539 181 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 MFAP3LO75121 409 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 RECQL5O94762 991 aaPredicted RBP4.84□□□□□ -1.63
EPHA3-202ENST00000452448 TOP3BO95985 862 aaKnown RBP4.84□□□□□ -1.63
EPHA3-202ENST00000452448 INHBBP09529 407 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms