RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.1■□□□□ 0.81
VSX1-206ENST00000444511 LOC105369274A0A096LPK9 316 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 LOC102723532A0A0G2JNH3 316 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 ARHGEF33A8MVX0 844 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 NRP2O60462 931 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 KRT14P02533 472 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 RPA3P35244 121 aaPredicted RBP20.1■□□□□ 0.81
VSX1-206ENST00000444511 MAGEA6P43360 314 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 TSTA3Q13630 321 aaPredicted RBP20.1■□□□□ 0.81
VSX1-206ENST00000444511 KLHL38Q2WGJ6 581 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 TUBB8Q3ZCM7 444 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.1■□□□□ 0.81
VSX1-206ENST00000444511 PRMT9Q6P2P2 845 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 KIRREL2Q6UWL6 708 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 CENPUQ71F23 418 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 CILP2Q8IUL8 1156 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 LRRC8AQ8IWT6 810 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 OR4N4Q8N0Y3 316 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 DTWD1Q8N5C7 304 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 SMPDL3AQ92484 453 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 CRB3Q9BUF7 120 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 INTS10Q9NVR2 710 aaKnown RBP20.1■□□□□ 0.81
VSX1-206ENST00000444511 CUEDC1Q9NWM3 386 aaPredicted RBP20.1■□□□□ 0.81
VSX1-206ENST00000444511 GALPQ9UBC7 116 aa20.1■□□□□ 0.81
VSX1-206ENST00000444511 RP1L1Q8IWN7 2480 aaPredicted RBP20.1■□□□□ 0.81
VSX1-206ENST00000444511 OR2A25A4D2G3 310 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 PSIP1O75475 530 aaKnown RBP20.09■□□□□ 0.81
VSX1-206ENST00000444511 USP1O94782 785 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 CATP04040 527 aaKnown RBP20.09■□□□□ 0.81
VSX1-206ENST00000444511 ERGP11308 486 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 YBX1P67809 324 aaKnown RBP20.09■□□□□ 0.81
VSX1-206ENST00000444511 OCA2Q04671 838 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 THOC5Q13769 683 aaKnown RBP20.09■□□□□ 0.81
VSX1-206ENST00000444511 DHX34Q14147 1143 aaKnown RBP20.09■□□□□ 0.81
VSX1-206ENST00000444511 NR6A1Q15406 480 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 MUM1Q2TAK8 710 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 TTLL9Q3SXZ7 439 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 C4orf17Q53FE4 359 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 AGAP7PQ5VUJ5 663 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 ANKRD22Q5VYY1 191 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 ZNF470Q6ECI4 717 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 SUSD1Q6UWL2 747 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 Q6ZS92 163 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 CAND1Q86VP6 1230 aaKnown RBP20.09■□□□□ 0.81
VSX1-206ENST00000444511 ZNF669Q96BR6 464 aaPredicted RBP20.09■□□□□ 0.81
VSX1-206ENST00000444511 AGAP4Q96P64 663 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 TRIM56Q9BRZ2 755 aaKnown RBP20.09■□□□□ 0.81
VSX1-206ENST00000444511 MRPS30Q9NP92 439 aaKnown RBP20.09■□□□□ 0.81
VSX1-206ENST00000444511 PLEKHB1Q9UF11 243 aaPredicted RBP20.09■□□□□ 0.81
VSX1-206ENST00000444511 COPG1Q9Y678 874 aaKnown RBP20.09■□□□□ 0.81
VSX1-206ENST00000444511 SHANK1Q9Y566 2161 aa20.09■□□□□ 0.81
VSX1-206ENST00000444511 MAGEB16A2A368 324 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 CTAGE9A4FU28 777 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 VSTM2BA6NLU5 285 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 ZNF839A8K0R7 811 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 MYO1CO00159 1063 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 NRDCO43847 1150 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 VPS26AO75436 327 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 MED26O95402 600 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 MLNP12872 115 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 HSD17B2P37059 387 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 GLRBP48167 497 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 CARSP49589 748 aaKnown RBP20.08■□□□□ 0.81
VSX1-206ENST00000444511 ARHGAP19Q14CB8 494 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 TTC27Q6P3X3 843 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 PARP9Q8IXQ6 854 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 PRSS58Q8IYP2 241 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 STT3BQ8TCJ2 826 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 INPP5DQ92835 1189 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 MAGOHBQ96A72 148 aaKnown RBP20.08■□□□□ 0.81
VSX1-206ENST00000444511 MIEF2Q96C03 454 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 CABS1Q96KC9 395 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 WDR77Q9BQA1 342 aaPredicted RBP20.08■□□□□ 0.81
VSX1-206ENST00000444511 CCDC68Q9H2F9 335 aa20.08■□□□□ 0.81
VSX1-206ENST00000444511 XAB2Q9HCS7 855 aaKnown RBP20.08■□□□□ 0.81
VSX1-206ENST00000444511 STOX2Q9P2F5 926 aaPredicted RBP20.08■□□□□ 0.81
VSX1-206ENST00000444511 ZNF282Q9UDV7 671 aaPredicted RBP20.08■□□□□ 0.81
VSX1-206ENST00000444511 CCDC88CQ9P219 2028 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 FAM237BA0A1B0GVD1 139 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 SDR42E2A6NKP2 422 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 PHF2O75151 1096 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 FBLP22087 321 aaKnown RBP20.07■□□□□ 0.8
VSX1-206ENST00000444511 KLC1Q07866 573 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 HIF1AQ16665 826 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 FBXO42Q6P3S6 717 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 CUZD1Q86UP6 607 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 REXO1L1PQ8IX06 675 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 OR11G2Q8NGC1 345 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 PPP4R1Q8TF05 950 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 PKP4Q99569 1192 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 PLCD4Q9BRC7 762 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 LHPPQ9H008 270 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 UTP6Q9NYH9 597 aaKnown RBP20.07■□□□□ 0.8
VSX1-206ENST00000444511 CDC14AQ9UNH5 594 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 PPP2R2CQ9Y2T4 447 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 PCDHGA10Q9Y5H3 936 aa20.07■□□□□ 0.8
VSX1-206ENST00000444511 H0YGG7 62 aa20.06■□□□□ 0.8
VSX1-206ENST00000444511 GOLGA8MH3BSY2 632 aa20.06■□□□□ 0.8
VSX1-206ENST00000444511 CCNDBP1O95273 360 aa20.06■□□□□ 0.8
VSX1-206ENST00000444511 CBX6O95503 412 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms