RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 HLXQ14774 488 aaPredicted RBP4.77□□□□□ -1.65
GABPB1-204ENST00000396464 ZRSR1Q15695 479 aaKnown RBP4.77□□□□□ -1.65
GABPB1-204ENST00000396464 TPD52L1Q16890 204 aaPredicted RBP4.77□□□□□ -1.65
GABPB1-204ENST00000396464 PNLIPRP3Q17RR3 467 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 ANKRD55Q3KP44 614 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 TBC1D25Q3MII6 688 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 MPPE1Q53F39 396 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 C6orf89Q6UWU4 347 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 TRILQ7L0X0 811 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 NRARPQ7Z6K4 114 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 ADGRD2Q7Z7M1 963 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 SYT12Q8IV01 421 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 ZBTB2Q8N680 514 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 EXD1Q8NHP7 514 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 TMEM125Q96AQ2 219 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 ORAI1Q96D31 301 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 C4orf36Q96KX1 117 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 HARBI1Q96MB7 349 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 ANKRD27Q96NW4 1050 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 FCRL4Q96PJ5 515 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 TEFMQ96QE5 360 aaKnown RBP4.77□□□□□ -1.65
GABPB1-204ENST00000396464 ZSWIM1Q9BR11 485 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 FRMD8Q9BZ67 464 aaPredicted RBP4.77□□□□□ -1.65
GABPB1-204ENST00000396464 NACA2Q9H009 215 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 C8orf33Q9H7E9 229 aaPredicted RBP4.77□□□□□ -1.65
GABPB1-204ENST00000396464 UPF2Q9HAU5 1272 aaKnown RBP4.77□□□□□ -1.65
GABPB1-204ENST00000396464 CYP3A43Q9HB55 503 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 MYNNQ9NPC7 610 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 GTSE1Q9NYZ3 720 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 STK39Q9UEW8 545 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 PCDHA12Q9UN75 941 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 KIF16BQ96L93 1317 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 LOC100506127A0A0U1RQW1 187 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 H3BMM5 538 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 K7ERQ8 282 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 VCYO14598 125 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 PRYO14603 147 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 MAP2K7O14733 419 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 ALOX15BO15296 676 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 YKT6O15498 198 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 FLRT2O43155 660 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 AKR7A2O43488 359 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 TMPRSS11DO60235 418 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 ECE2O60344 883 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 GNA14O95837 355 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 LGI1O95970 557 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 HLA-DQA2P01906 255 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 FESP07332 822 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 ETFAP13804 333 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 CA8P35219 290 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 ADRA1AP35348 466 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 Q3ZCU0 254 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 TIGD2Q4W5G0 525 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 GPAT3Q53EU6 434 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 PLEKHO1Q53GL0 409 aaPredicted RBP4.76□□□□□ -1.65
GABPB1-204ENST00000396464 TMEM63BQ5T3F8 832 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 PIP5KL1Q5T9C9 394 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 FIGLAQ6QHK4 219 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 Q6ZPA2 131 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 PAQR9Q6ZVX9 377 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 MAVSQ7Z434 540 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 PHLDB2Q86SQ0 1253 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 TMEM217Q8N7C4 229 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 RDM1Q8NG50 284 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 OR4A16Q8NH70 328 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 LIPHQ8WWY8 451 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 RHBDF1Q96CC6 855 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 LRR1Q96L50 414 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 SENP8Q96LD8 212 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 C12orf66Q96MD2 445 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 SLITRK1Q96PX8 696 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 FRG2BQ96QU4 278 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 MYADMQ96S97 322 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 SMC6Q96SB8 1091 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 ACOX2Q99424 681 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 CITED1Q99966 193 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 FAM110AQ9BQ89 295 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 TMEM79Q9BSE2 394 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 ABHD14AQ9BUJ0 271 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 NUP58Q9BVL2 599 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 ACTRT3Q9BYD9 372 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 NMNAT2Q9BZQ4 307 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 AMBRA1Q9C0C7 1298 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 CUEDC2Q9H467 287 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 WDR76Q9H967 626 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 FAM207AQ9NSI2 230 aaPredicted RBP4.76□□□□□ -1.65
GABPB1-204ENST00000396464 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.76□□□□□ -1.65
GABPB1-204ENST00000396464 RDH8Q9NYR8 311 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 PACSIN3Q9UKS6 424 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 MRPS33Q9Y291 106 aaKnown RBP4.76□□□□□ -1.65
GABPB1-204ENST00000396464 PADI2Q9Y2J8 665 aa4.76□□□□□ -1.65
GABPB1-204ENST00000396464 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.76□□□□□ -1.65
GABPB1-204ENST00000396464 NPC1L1Q9UHC9 1359 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 ABCC4O15439 1325 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 MAST3O60307 1309 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 A0A1W2PPW3 197 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 TTC26A0AVF1 554 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 ILVBLA1L0T0 632 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 ARHGEF35A5YM69 484 aa4.75□□□□□ -1.65
GABPB1-204ENST00000396464 TMEM8BA6NDV4 472 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms