RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 NUFIP1Q9UHK0 495 aaKnown RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 EIF2B4Q9UI10 523 aaKnown RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF705FA8MVS1 300 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 IFNA10P01566 189 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF705DP0CH99 300 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF705BP0CI00 300 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 DLSTP36957 453 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF136P52737 540 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 ASTE1Q2TB18 679 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 OR56B2PQ8NGI1 322 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 SLC25A44Q96H78 314 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 ZFP37Q9Y6Q3 630 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 WASF2Q9Y6W5 498 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 LILRB5O75023 590 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 TGFB2P61812 414 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 FASTKD3Q14CZ7 662 aaKnown RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 OTOP1Q7RTM1 612 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 SLC9B2Q86UD5 537 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF347Q96SE7 839 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 RAD9AQ99638 391 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 TLR10Q9BXR5 811 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 POLR2J3Q9H1A7 115 aaKnown RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 KAT8Q9H7Z6 458 aaKnown RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 FAM227AF5H4B4 570 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 IFNA5P01569 189 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 MLLT10P55197 1068 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 MAB21L1Q13394 359 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 SVOPLQ8N434 492 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 MALSU1Q96EH3 234 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 CLCQ05315 142 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 ADGRE1Q14246 886 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 ANKDD1AQ495B1 522 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 SLC51AQ86UW1 340 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 OR52E4Q8NGH9 312 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 DPPA5A6NC42 116 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF254O75437 659 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF41P51814 821 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 MERTKQ12866 999 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 BTBD16Q32M84 506 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 DCDC5Q6ZRR9 648 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 COPS5Q92905 334 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 RPL10LQ96L21 214 aaKnown RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 L2HGDHQ9H9P8 463 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 REREQ9P2R6 1566 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 H3BNX3 289 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 TGFB1P01137 390 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 VASH1Q7L8A9 365 aaPredicted RBP16.03■□□□□ 0.16
PTCH1-201ENST00000331920 SHKBP1Q8TBC3 707 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 DUSP16Q9BY84 665 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 SQORQ9Y6N5 450 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 RAB36O95755 333 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 GJB1P08034 283 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 OR6N1Q8NGY5 312 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF670Q9BS34 389 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 SAV1Q9H4B6 383 aaPredicted RBP16.03■□□□□ 0.16
PTCH1-201ENST00000331920 TMEM184CQ9NVA4 438 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 GRHPRQ9UBQ7 328 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 B3GALT1Q9Y5Z6 326 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 CFAP20Q9Y6A4 193 aaKnown RBP16.03■□□□□ 0.16
PTCH1-201ENST00000331920 CLCA1A8K7I4 914 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 DDNO94850 711 aaPredicted RBP16.03■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF81P51508 661 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 LIMK2P53671 638 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 RNF4P78317 190 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 SP3Q02447 781 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 KLF10Q13118 480 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 SLC22A16Q86VW1 577 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 GLYATL2Q8WU03 294 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 ANKRD33BA6NCL7 494 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 PTPRAP18433 802 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 TSTQ16762 297 aaKnown RBP16.03■□□□□ 0.16
PTCH1-201ENST00000331920 TAS1R3Q7RTX0 852 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 RADILQ96JH8 1075 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 CDK15Q96Q40 435 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 AGAP2Q99490 1192 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 NDC1Q9BTX1 674 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 GLIS2Q9BZE0 524 aaPredicted RBP16.03■□□□□ 0.16
PTCH1-201ENST00000331920 A6NLC8 198 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 EPCAMP16422 314 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 OR4D6Q8NGJ1 314 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 P2RY11Q96G91 374 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 TSNAXQ99598 290 aaKnown RBP16.03■□□□□ 0.16
PTCH1-201ENST00000331920 SLC35A5Q9BS91 424 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 ANKHQ9HCJ1 492 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 TAS2R10Q9NYW0 307 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 FCF1Q9Y324 198 aaKnown RBP16.03■□□□□ 0.16
PTCH1-201ENST00000331920 BACE2Q9Y5Z0 518 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 A0A1B0GVI7 797 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 PEX12O00623 359 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 PEX2P28328 305 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 AQP4P55087 323 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 CRTC1Q6UUV9 634 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 ANKRD52Q8NB46 1076 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 TRIB2Q92519 343 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 COQ10BQ9H8M1 238 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 CRTAC1Q9NQ79 661 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 PCDHGC3Q9UN70 934 aa16.03■□□□□ 0.16
PTCH1-201ENST00000331920 CDRT1O95170 752 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 POTEHQ6S545 545 aa16.02■□□□□ 0.16
PTCH1-201ENST00000331920 RBM15BQ8NDT2 890 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms