RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 KCNA7Q96RP8 456 aa14.26□□□□□ -0.13
SHKBP1-211ENST00000595945 ELF4Q99607 663 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-211ENST00000595945 MIPEPQ99797 713 aa14.26□□□□□ -0.13
SHKBP1-211ENST00000595945 SLC29A3Q9BZD2 475 aa14.26□□□□□ -0.13
SHKBP1-211ENST00000595945 XKR8Q9H6D3 395 aa14.26□□□□□ -0.13
SHKBP1-211ENST00000595945 CAPN10Q9HC96 672 aa14.26□□□□□ -0.13
SHKBP1-211ENST00000595945 UCKL1Q9NWZ5 548 aa14.26□□□□□ -0.13
SHKBP1-211ENST00000595945 CPNE7Q9UBL6 633 aa14.26□□□□□ -0.13
SHKBP1-211ENST00000595945 SH2B3Q9UQQ2 575 aa14.26□□□□□ -0.13
SHKBP1-211ENST00000595945 RNF11Q9Y3C5 154 aa14.26□□□□□ -0.13
SHKBP1-211ENST00000595945 DNAJC15Q9Y5T4 150 aa14.26□□□□□ -0.13
SHKBP1-211ENST00000595945 TRBV23OR9-2A0A075B6M9 112 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 SDHDO14521 159 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 NOBOXO60393 691 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 WFS1O76024 890 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 CLDN9O95484 217 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 UROSP10746 265 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 SERPINB3P29508 390 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 BTKQ06187 659 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 KRT33BQ14525 404 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 TBCCQ15814 346 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 SLC9B1Q4ZJI4 515 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 VWA5B1Q5TIE3 1220 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 PRAMEF13Q5VWM6 474 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 SUSD1Q6UWL2 747 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 SLCO4C1Q6ZQN7 724 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 RNF165Q6ZSG1 346 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 EFL1Q7Z2Z2 1120 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 KANSL1Q7Z3B3 1105 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 RBM12BQ8IXT5 1001 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 DCBLD1Q8N8Z6 715 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 CEP76Q8TAP6 659 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 ATP6V1E2Q96A05 226 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 LOXL4Q96JB6 756 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 MAELQ96JY0 434 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 MAGEB10Q96LZ2 347 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 EBF4Q9BQW3 602 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 HAUS8Q9BT25 410 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 PCBD2Q9H0N5 130 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 TUBB1Q9H4B7 451 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 MEAF6Q9HAF1 191 aa14.25□□□□□ -0.13
SHKBP1-211ENST00000595945 A0A1B0GTQ1 180 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 TRPC5OSA6NMA1 111 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 E7EQ34 232 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 GIPC1O14908 333 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 CLGNO14967 610 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 EPN2O95208 641 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 VIPP01282 170 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 CAPN1P07384 714 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 ANXA6P08133 673 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 GIMD1P0DJR0 217 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 HGFP14210 728 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 CD22P20273 847 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 PEBP1P30086 187 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 SHMT2P34897 504 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 GRIK2Q13002 908 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 CHIT1Q13231 466 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 GPR18Q14330 331 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 PDCD2Q16342 344 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 LIPJQ5W064 366 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 SLC9B2Q86UD5 537 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 TRIM48Q8IWZ4 208 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 HOMEZQ8IX15 550 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 ADGRF3Q8IZF5 1079 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 SLC25A45Q8N413 288 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 CDYL2Q8N8U2 506 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 AVL9Q8NBF6 648 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 TWIST2Q8WVJ9 160 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 NEIL2Q969S2 332 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 PLCD4Q9BRC7 762 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 NUF2Q9BZD4 464 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 EHD1Q9H4M9 534 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 ACTR8Q9H981 624 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 OR6C2Q9NZP2 312 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 APOBEC2Q9Y235 224 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 FIS1Q9Y3D6 152 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 DYRK1BQ9Y463 629 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 TIMM22Q9Y584 194 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 KCNE2Q9Y6J6 123 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 UNC13CQ8NB66 2214 aa14.24□□□□□ -0.13
SHKBP1-211ENST00000595945 OTOGLQ3ZCN5 2332 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 FAM221BA6H8Z2 402 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 B4DGG1 531 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 MANBAO00462 879 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 SDC3O75056 442 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 SKAP2O75563 359 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 JUPP14923 745 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 GNAZP19086 355 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 EPHA8P29322 1005 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 FASLGP48023 281 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 ARRB1P49407 418 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 HTR6P50406 440 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 IRF8Q02556 426 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 BNIP3Q12983 259 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 DOC2AQ14183 400 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 XKR7Q5GH72 579 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 TCHHL1Q5QJ38 904 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 ATG9BQ674R7 924 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 GRHL2Q6ISB3 625 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms