RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 TRIM72Q6ZMU5 477 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 ARCQ7LC44 396 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 CHST15Q7LFX5 561 aaPredicted RBP4.7□□□□□ -1.66
ERCC1-216ENST00000592444 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.7□□□□□ -1.66
ERCC1-216ENST00000592444 ATG4DQ86TL0 474 aaPredicted RBP4.7□□□□□ -1.66
ERCC1-216ENST00000592444 TMEM110Q86TL2 294 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 TAC4Q86UU9 113 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 GALNT13Q8IUC8 556 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 TRIM48Q8IWZ4 208 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 KBTBD2Q8IY47 623 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 TTC39CQ8N584 583 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 NIPA2Q8N8Q9 360 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 ATP6V0D2Q8N8Y2 350 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 AVL9Q8NBF6 648 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 C1orf131Q8NDD1 294 aaKnown RBP4.7□□□□□ -1.66
ERCC1-216ENST00000592444 ZNF397Q8NF99 534 aaPredicted RBP4.7□□□□□ -1.66
ERCC1-216ENST00000592444 OR11G2Q8NGC1 345 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 CLEC4CQ8WTT0 213 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 SMPDL3BQ92485 455 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 ALG3Q92685 438 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 ISG20Q96AZ6 181 aaKnown RBP4.7□□□□□ -1.66
ERCC1-216ENST00000592444 LRRC46Q96FV0 321 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 MESP1Q9BRJ9 268 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 TTYH2Q9BSA4 534 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 RAB33BQ9H082 229 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 THAP2Q9H0W7 228 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 GOLPH3Q9H4A6 298 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 RETREG1Q9H6L5 497 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 SP110Q9HB58 689 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 FANCEQ9HB96 536 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 ZNF701Q9NV72 531 aaPredicted RBP4.7□□□□□ -1.66
ERCC1-216ENST00000592444 SOHLH2Q9NX45 425 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 MYO1AQ9UBC5 1043 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 EGFL7Q9UHF1 273 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 TSPAN16Q9UKR8 245 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 KCNK6Q9Y257 313 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 PCYT1BQ9Y5K3 369 aaPredicted RBP4.7□□□□□ -1.66
ERCC1-216ENST00000592444 ALG6Q9Y672 507 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.7□□□□□ -1.66
ERCC1-216ENST00000592444 CSMD3Q7Z407 3707 aa4.7□□□□□ -1.66
ERCC1-216ENST00000592444 GOLGA6CA6NDK9 693 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 GOLGA6BA6NDN3 693 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 GOLGA6L9A6NEM1 432 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 C3orf70A6NLC5 250 aaPredicted RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 C2CD4BA6NLJ0 364 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 XPO1O14980 1071 aaKnown RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 CDC40O60508 579 aaKnown RBP eCLIP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 GSRP00390 522 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 PTMAP06454 111 aaKnown RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 ELFN1P0C7U0 828 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 GOLGA6DP0CG33 693 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 CCDC166P0CW27 439 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 VDRP11473 427 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 ZNF16P17020 682 aaPredicted RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 ZNF24P17028 368 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 XRCC1P18887 633 aaPredicted RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 FUT4P22083 530 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 ZFP36P26651 326 aaKnown RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 ETFBP38117 255 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 ST13P50502 369 aaKnown RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 ASCL1P50553 236 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 RPL7AP62424 266 aaKnown RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 DCDP81605 110 aaKnown RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 SLC25A11Q02978 314 aaKnown RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 CDK5R2Q13319 367 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 MAMLD1Q13495 774 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 POLD3Q15054 466 aaPredicted RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 STILQ15468 1287 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 RBBP7Q16576 425 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 RAB6CQ53S08 254 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 C2CD6Q53TS8 623 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 RPS26P11Q5JNZ5 115 aaPredicted RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 DNTTIP2Q5QJE6 756 aaKnown RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 GPRC6AQ5T6X5 926 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 TAF3Q5VWG9 929 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 NAA35Q5VZE5 725 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 ACAD10Q6JQN1 1059 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 PMF1Q6P1K2 205 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 LIPIQ6XZB0 460 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 SLC26A9Q7LBE3 791 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 OTOAQ7RTW8 1153 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 NT5DC3Q86UY8 548 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 CREBRFQ8IUR6 639 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 SLC35F6Q8N357 371 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 RNF10Q8N5U6 811 aaKnown RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 ANKRD52Q8NB46 1076 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 FAM71BQ8TC56 605 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 CENPIQ92674 756 aaPredicted RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 ANP32BQ92688 251 aaKnown RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 KIAA1191Q96A73 305 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 WDR89Q96FK6 387 aaPredicted RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 HES6Q96HZ4 224 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 CCDC42Q96M95 316 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 C16orf45Q96MC5 204 aaPredicted RBP4.69□□□□□ -1.66
ERCC1-216ENST00000592444 FANCD2OSQ96PS1 177 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 KLHL25Q9H0H3 589 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 RAB6CQ9H0N0 254 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 CHODLQ9H9P2 273 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 NPHS2Q9NP85 383 aa4.69□□□□□ -1.66
ERCC1-216ENST00000592444 CNGB3Q9NQW8 809 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms