RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-209ENST00000576921 LACTB2Q53H82 288 aaPredicted RBP20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 ZC3H12BQ5HYM0 836 aaKnown RBP20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 MLIPQ5VWP3 458 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 ZNF385CQ66K41 422 aaPredicted RBP20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 CPZQ66K79 652 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 SUSD1Q6UWL2 747 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 NEK10Q6ZWH5 1172 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 CPNE9Q8IYJ1 553 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 C17orf53Q8N3J3 647 aaPredicted RBP20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 C2CD4AQ8NCU7 369 aaPredicted RBP20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 PROKR1Q8TCW9 393 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 CD200R1Q8TD46 325 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 THAP4Q8WY91 577 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 INPP5DQ92835 1189 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 CERS2Q96G23 380 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 SNF8Q96H20 258 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 KRT12Q99456 494 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 PKP4Q99569 1192 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 SELENOSQ9BQE4 189 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 AARSD1Q9BTE6 412 aaKnown RBP20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 SLC17A6Q9P2U8 582 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 TRMT6Q9UJA5 497 aaKnown RBP20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 PADI2Q9Y2J8 665 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 DHRS7Q9Y394 339 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 HEATR5BQ9P2D3 2071 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 A0A1W2PPV9 198 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 ARGFXA6NJG6 315 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 MKRN2OSH3BPM6 223 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 ENO3P13929 434 aaPredicted RBP20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 MCM3P25205 808 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 RPA3P35244 121 aaPredicted RBP20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 ELK3P41970 407 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 CHAF1BQ13112 559 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 HIF1AQ16665 826 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 HIBCHQ6NVY1 386 aaPredicted RBP20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 PIWIL4Q7Z3Z4 852 aaKnown RBP20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 OR2A1Q8NGT9 310 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 DLG3Q92796 817 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 GBP5Q96PP8 586 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 C17orf62Q9BQA9 187 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 TRIM4Q9C037 500 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 ABCF3Q9NUQ8 709 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 IFT80Q9P2H3 777 aaPredicted RBP20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 KLHL42Q9P2K6 505 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 ZC3H7BQ9UGR2 993 aaKnown RBP20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 NDOR1Q9UHB4 597 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 TP53TG5Q9Y2B4 290 aa20.29■□□□□ 0.84
HCFC1R1-209ENST00000576921 MED13Q9UHV7 2174 aa20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 NRP2O60462 931 aa20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 SEC31AO94979 1220 aaKnown RBP20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 MPC1LP0DKB6 136 aa20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 ERGP11308 486 aa20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 NR1D1P20393 614 aa20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 ALAS2P22557 587 aa20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 CMPK1P30085 196 aa20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 CARSP49589 748 aaKnown RBP20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 ARL4CP56559 192 aa20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 DCDP81605 110 aaKnown RBP20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 PPFIBP2Q8ND30 876 aa20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 SMPDL3AQ92484 453 aa20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 TRIM55Q9BYV6 548 aa20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 RNF14Q9UBS8 474 aa20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 TLK1Q9UKI8 766 aa20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 MDC1Q14676 2089 aaKnown RBP20.28■□□□□ 0.84
HCFC1R1-209ENST00000576921 A0A0J9YVX5 310 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 EFCAB8A8MWE9 144 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 TARM1B6A8C7 271 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 SMAPO00193 183 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 CTSVO60911 334 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 SLC16A8O95907 504 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 OTX2P32243 289 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 PNLIPRP1P54315 467 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 VSX2P58304 361 aaPredicted RBP20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 YBX1P67809 324 aaKnown RBP20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 MRPS25P82663 173 aaKnown RBP20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 RBM20Q5T481 1227 aaKnown RBP20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 UGT3A1Q6NUS8 523 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 ATG14Q6ZNE5 492 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 TTLL10Q6ZVT0 673 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 ANKMY2Q8IV38 441 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 APLFQ8IW19 511 aaPredicted RBP20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 TTC29Q8NA56 475 aaPredicted RBP20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 ADAMTS17Q8TE56 1095 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 ZUFSPQ96AP4 578 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 DPH7Q9BTV6 452 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 DHRS4Q9BTZ2 278 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 SLC6A20Q9NP91 592 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 MRPS30Q9NP92 439 aaKnown RBP20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 ACSS2Q9NR19 701 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 TAC3Q9UHF0 121 aa20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 PTRH2Q9Y3E5 179 aaKnown RBP20.27■□□□□ 0.84
HCFC1R1-209ENST00000576921 ZNF839A8K0R7 811 aa20.26■□□□□ 0.83
HCFC1R1-209ENST00000576921 SUV39H1O43463 412 aa20.26■□□□□ 0.83
HCFC1R1-209ENST00000576921 ZBTB14O43829 449 aa20.26■□□□□ 0.83
HCFC1R1-209ENST00000576921 GABRB3P28472 473 aa20.26■□□□□ 0.83
HCFC1R1-209ENST00000576921 FOLR3P41439 243 aa20.26■□□□□ 0.83
HCFC1R1-209ENST00000576921 ARSFP54793 590 aa20.26■□□□□ 0.83
HCFC1R1-209ENST00000576921 GRM7Q14831 915 aa20.26■□□□□ 0.83
HCFC1R1-209ENST00000576921 ARHGAP19Q14CB8 494 aa20.26■□□□□ 0.83
HCFC1R1-209ENST00000576921 NKAIN1Q4KMZ8 207 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms