RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 FCRL6Q6DN72 434 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 WDR93Q6P2C0 686 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 OR2L3Q8NG85 312 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 SLC22A18Q96BI1 424 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 MED8Q96G25 268 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 HIST1H2AHQ96KK5 128 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 UBXN10Q96LJ8 280 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 CCDC138Q96M89 665 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 ZNF578Q96N58 590 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-224ENST00000523873 DCBLD2Q96PD2 775 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 HIST1H2AJQ99878 128 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 H2AFJQ9BTM1 129 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 PDE7BQ9NP56 450 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 FBXO8Q9NRD0 319 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 WDR70Q9NW82 654 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 DKK4Q9UBT3 224 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 SH2B3Q9UQQ2 575 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 PCDHB11Q9Y5F2 797 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 APC2O95996 2303 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 ACACAQ13085 2346 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 TEX51A0A1B0GUA7 166 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 NCF1BA6NI72 391 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-224ENST00000523873 SMIM23A6NLE4 172 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 NCF1CA8MVU1 366 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-224ENST00000523873 FOXO6A8MYZ6 492 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 POLR1CO15160 346 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-224ENST00000523873 NCF1P14598 390 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-224ENST00000523873 HSD17B2P37059 387 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 SLCO1A2P46721 670 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 GLRBP48167 497 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 GABRA4P48169 554 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 KCNC1P48547 511 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 SERPINB9P50453 376 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 RAB15P59190 212 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 ERVPABLB-1P60509 514 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 TGIF1Q15583 401 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 TMTC4Q5T4D3 741 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 THEMIS2Q5TEJ8 643 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 FIGLAQ6QHK4 219 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 ADGRD1Q6QNK2 874 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 CEACAM20Q6UY09 585 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 FRA10AC1Q70Z53 315 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 TAOK1Q7L7X3 1001 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 TBC1D1Q86TI0 1168 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-224ENST00000523873 PROSER1Q86XN7 944 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 CENPLQ8N0S6 344 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-224ENST00000523873 CARFQ8N187 725 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 PLD6Q8N2A8 252 aaKnown RBP12.34□□□□□ -0.43
VEGFA-224ENST00000523873 KDF1Q8NAX2 398 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-224ENST00000523873 OR1L3Q8NH93 324 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 OR2W6PQ8NHA6 318 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.34□□□□□ -0.435e-12■■■■■ 41.4
VEGFA-224ENST00000523873 FGF11Q92914 225 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 PYCR2Q96C36 320 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 ZNF501Q96CX3 271 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-224ENST00000523873 EGFL8Q99944 293 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 DDA1Q9BW61 102 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 TRIM54Q9BYV2 358 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 ALG9Q9H6U8 611 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 CCDC177Q9NQR7 707 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-224ENST00000523873 FGF21Q9NSA1 209 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 CUEDC1Q9NWM3 386 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-224ENST00000523873 TBK1Q9UHD2 729 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 ZNF180Q9UJW8 692 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 RARRES3Q9UL19 164 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 ZMIZ1Q9ULJ6 1067 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 NOVA2Q9UNW9 492 aaKnown RBP12.34□□□□□ -0.43
VEGFA-224ENST00000523873 ACOT9Q9Y305 439 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 OARD1Q9Y530 152 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 PCDHGA7Q9Y5G6 932 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 PCDHGA3Q9Y5H0 932 aa12.34□□□□□ -0.43
VEGFA-224ENST00000523873 MAP1BP46821 2468 aaKnown RBP12.34□□□□□ -0.43
VEGFA-224ENST00000523873 SCN2AQ99250 2005 aa12.33□□□□□ -0.43
VEGFA-224ENST00000523873 A0A087X1B8 175 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 IGKV1-8A0A0C4DH67 115 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 PABPN1LA6NDY0 278 aaKnown RBP12.33□□□□□ -0.44
VEGFA-224ENST00000523873 ZNF839A8K0R7 811 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 TMEM150CB9EJG8 249 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 NVLO15381 856 aaKnown RBP12.33□□□□□ -0.44
VEGFA-224ENST00000523873 KRT38O76015 456 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 ENO2P09104 434 aaPredicted RBP12.33□□□□□ -0.44
VEGFA-224ENST00000523873 LTA4HP09960 611 aaKnown RBP12.33□□□□□ -0.44
VEGFA-224ENST00000523873 FGF5P12034 268 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 TFEBP19484 476 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 CMPK1P30085 196 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 MAGEA12P43365 314 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 PCBP4P57723 403 aaKnown RBP12.33□□□□□ -0.44
VEGFA-224ENST00000523873 ATP6V0D1P61421 351 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 ACY1Q03154 408 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 SRSF6Q13247 344 aaKnown RBP12.33□□□□□ -0.44
VEGFA-224ENST00000523873 TAF1BQ53T94 588 aaPredicted RBP12.33□□□□□ -0.44
VEGFA-224ENST00000523873 TMEM164Q5U3C3 297 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 PRAMEF13Q5VWM6 474 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 ICE2Q659A1 982 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 ADAMTSL2Q86TH1 951 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 ISCA2Q86U28 154 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 PPP1R3BQ86XI6 285 aa12.33□□□□□ -0.44
VEGFA-224ENST00000523873 SNIP1Q8TAD8 396 aaKnown RBP12.33□□□□□ -0.44
VEGFA-224ENST00000523873 EPS8L3Q8TE67 593 aaKnown RBP12.33□□□□□ -0.44
VEGFA-224ENST00000523873 ANKRD7Q92527 254 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms