RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 DENND4AQ7Z401 1863 aa17.85■□□□□ 0.45
SDC2-202ENST00000518385 NPEPPSL1A6NEC2 478 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 OTOL1A6NHN0 477 aaPredicted RBP17.84■□□□□ 0.45
SDC2-202ENST00000518385 TPST1O60507 370 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 CCDC159P0C7I6 412 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 EEF1DP29692 281 aaKnown RBP17.84■□□□□ 0.45
SDC2-202ENST00000518385 GRK3P35626 688 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 DCDC1P59894 354 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 ARHGEF7Q14155 803 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 TMEM215Q68D42 235 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 GLYATQ6IB77 296 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 TSPAN33Q86UF1 283 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 ZDHHC13Q8IUH4 622 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 GPR26Q8NDV2 337 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 SNX19Q92543 992 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 FGF14Q92915 247 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 EXT2Q93063 718 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 MUL1Q969V5 352 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 VPS33AQ96AX1 596 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 KXD1Q9BQD3 176 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 SELENONQ9NZV5 590 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 TDRKHQ9Y2W6 561 aaKnown RBP17.84■□□□□ 0.45
SDC2-202ENST00000518385 HEMK1Q9Y5R4 338 aaPredicted RBP17.84■□□□□ 0.45
SDC2-202ENST00000518385 HSPE1-MOB4S4R3N1 261 aa17.84■□□□□ 0.45
SDC2-202ENST00000518385 IGLV3-16A0A075B6K0 115 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 A0A0U1RQS6 177 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 K7EPI3 171 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 SLC22A1O15245 554 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 BNIP3LO60238 219 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 S100BP04271 92 aaPredicted RBP17.83■□□□□ 0.45
SDC2-202ENST00000518385 GGT1P19440 569 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 VIPR1P32241 457 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 ZFP36L2P47974 494 aaKnown RBP17.83■□□□□ 0.45
SDC2-202ENST00000518385 SPINT3P49223 89 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 ST8SIA6P61647 398 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 TRIM16LQ309B1 348 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 CDKL4Q5MAI5 379 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 XAF1Q6GPH4 301 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 XKR5Q6UX68 686 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 C12orf40Q86WS4 652 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 CHST14Q8NCH0 376 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 TANKQ92844 425 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 EFHD2Q96C19 240 aaPredicted RBP17.83■□□□□ 0.45
SDC2-202ENST00000518385 ZNF382Q96SR6 550 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 COPS8Q99627 209 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 NECTIN3Q9NQS3 549 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 CD274Q9NZQ7 290 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 B4GALT6Q9UBX8 382 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 ENPP5Q9UJA9 477 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 PDE10AQ9Y233 779 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 REV3LO60673 3130 aa17.83■□□□□ 0.45
SDC2-202ENST00000518385 RAD51BO15315 384 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 SCELO95171 688 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 SLC25A14O95258 325 aaPredicted RBP17.83■□□□□ 0.44
SDC2-202ENST00000518385 MSH3P20585 1137 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 MATN1P21941 496 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 HRH2P25021 359 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 RYKP34925 604 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 CDH13P55290 713 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 PWP1Q13610 501 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 RUNX3Q13761 415 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 OXA1LQ15070 435 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 PCBP2Q15366 365 aaKnown RBP eCLIP17.83■□□□□ 0.444e-7■■■■□ 22.9
SDC2-202ENST00000518385 PLA2G4EQ3MJ16 856 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 ANKDD1AQ495B1 522 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 CCDC92Q53HC0 331 aaPredicted RBP17.83■□□□□ 0.44
SDC2-202ENST00000518385 C6orf141Q5SZD1 244 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 GPRC6AQ5T6X5 926 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 TTC23LQ6PF05 361 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 MTSS1LQ765P7 747 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 ZC3H7AQ8IWR0 971 aaKnown RBP17.83■□□□□ 0.44
SDC2-202ENST00000518385 OFCC1Q8IZS5 231 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 SPARTQ8N0X7 666 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 CLEC4FQ8N1N0 589 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 CPA6Q8N4T0 437 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 ZBTB2Q8N680 514 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 SLC15A4Q8N697 577 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 DNAJB14Q8TBM8 379 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 TBC1D20Q96BZ9 403 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 RNF145Q96MT1 663 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 MUS81Q96NY9 551 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 NEURL2Q9BR09 285 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 FAM126AQ9BYI3 521 aaPredicted RBP17.83■□□□□ 0.44
SDC2-202ENST00000518385 SARS2Q9NP81 518 aaKnown RBP17.83■□□□□ 0.44
SDC2-202ENST00000518385 KCTD5Q9NXV2 234 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 IL36AQ9UHA7 158 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 C3orf18Q9UK00 162 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 IKZF3Q9UKT9 509 aa17.83■□□□□ 0.44
SDC2-202ENST00000518385 BOLA2-SMG1P6H3BVE0 249 aa17.82■□□□□ 0.44
SDC2-202ENST00000518385 CNOT3O75175 753 aaKnown RBP17.82■□□□□ 0.44
SDC2-202ENST00000518385 FKBP9O95302 570 aa17.82■□□□□ 0.44
SDC2-202ENST00000518385 SIX3O95343 332 aaPredicted RBP17.82■□□□□ 0.44
SDC2-202ENST00000518385 FUCA1P04066 466 aa17.82■□□□□ 0.44
SDC2-202ENST00000518385 OR56A5P0C7T3 313 aa17.82■□□□□ 0.44
SDC2-202ENST00000518385 LINC00032P0C843 101 aa17.82■□□□□ 0.44
SDC2-202ENST00000518385 ZNF182P17025 639 aaPredicted RBP17.82■□□□□ 0.44
SDC2-202ENST00000518385 LHCGRP22888 699 aa17.82■□□□□ 0.44
SDC2-202ENST00000518385 SLC6A11P48066 632 aa17.82■□□□□ 0.44
SDC2-202ENST00000518385 MAD2L1Q13257 205 aaPredicted RBP17.82■□□□□ 0.44
SDC2-202ENST00000518385 EIF4HQ15056 248 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms