RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 EEF1DP29692 281 aaKnown RBP12.86□□□□□ -0.35
BRAT1-205ENST00000473879 GPR3P46089 330 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 FASLGP48023 281 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 SLC1A6P48664 564 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 NAGLUP54802 743 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 ABCE1P61221 599 aaKnown RBP12.86□□□□□ -0.35
BRAT1-205ENST00000473879 GABREP78334 506 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 RCN2Q14257 317 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 CLPPQ16740 277 aaPredicted RBP12.86□□□□□ -0.35
BRAT1-205ENST00000473879 ZNF678Q5SXM1 525 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 ANKS6Q68DC2 871 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 CAPRIN2Q6IMN6 1127 aaKnown RBP12.86□□□□□ -0.35
BRAT1-205ENST00000473879 IGF2-ASQ6U949 168 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 WASH2PQ6VEQ5 465 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 DCUN1D3Q8IWE4 304 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 KIRREL3Q8IZU9 778 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 SFRP1Q8N474 314 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 CCNYL1Q8N7R7 359 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 Q8N9G6 341 aaPredicted RBP12.86□□□□□ -0.35
BRAT1-205ENST00000473879 PATE1Q8WXA2 126 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 DLG3Q92796 817 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 LIN37Q96GY3 246 aaPredicted RBP12.86□□□□□ -0.35
BRAT1-205ENST00000473879 CNDP1Q96KN2 507 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 RMDN2Q96LZ7 410 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 CCDC138Q96M89 665 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 C7orf26Q96N11 449 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 TMEM74Q96NL1 305 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 ZNF317Q96PQ6 595 aaPredicted RBP12.86□□□□□ -0.35
BRAT1-205ENST00000473879 C1QTNF3Q9BXJ4 246 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 PITPNM3Q9BZ71 974 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 DRC3Q9H069 523 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 TRIT1Q9H3H1 467 aaKnown RBP12.86□□□□□ -0.35
BRAT1-205ENST00000473879 EML4Q9HC35 981 aaKnown RBP12.86□□□□□ -0.35
BRAT1-205ENST00000473879 WASH6PQ9NQA3 447 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 PSMD13Q9UNM6 376 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 PCDHGA8Q9Y5G5 932 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 MYO1CO00159 1063 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 PPM1DO15297 605 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 B4GAT1O43505 415 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 TLX3O43711 291 aaPredicted RBP12.85□□□□□ -0.35
BRAT1-205ENST00000473879 KDM1AO60341 852 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 EDF1O60869 148 aaKnown RBP12.85□□□□□ -0.35
BRAT1-205ENST00000473879 SUPT7LO94864 414 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 RPS17P08708 135 aaKnown RBP12.85□□□□□ -0.35
BRAT1-205ENST00000473879 SLC2A4P14672 509 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 RPL10P27635 214 aaKnown RBP12.85□□□□□ -0.35
BRAT1-205ENST00000473879 CCKBRP32239 447 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 BDKRB1P46663 353 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 PIK3CGP48736 1102 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 ZFP36L1Q07352 338 aaKnown RBP12.85□□□□□ -0.35
BRAT1-205ENST00000473879 BIRC2Q13490 618 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 PCBP2Q15366 365 aaKnown RBP eCLIP12.85□□□□□ -0.35
BRAT1-205ENST00000473879 TBC1D25Q3MII6 688 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.85□□□□□ -0.35
BRAT1-205ENST00000473879 IYDQ6PHW0 289 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 FRMD7Q6ZUT3 714 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 FAM47EQ6ZV65 393 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 CPLX4Q7Z7G2 160 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 CRLF3Q8IUI8 442 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 TBC1D21Q8IYX1 336 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 LRRC34Q8IZ02 419 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 RAB42Q8N4Z0 105 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 OR5K2Q8NHB8 316 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 WDR36Q8NI36 951 aaKnown RBP12.85□□□□□ -0.35
BRAT1-205ENST00000473879 SNIP1Q8TAD8 396 aaKnown RBP12.85□□□□□ -0.35
BRAT1-205ENST00000473879 FGF11Q92914 225 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 RAD51AP1Q96B01 352 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 RHBDF1Q96CC6 855 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 FBXL8Q96CD0 374 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 C12orf66Q96MD2 445 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 ZNF578Q96N58 590 aaPredicted RBP12.85□□□□□ -0.35
BRAT1-205ENST00000473879 TBC1D29Q9UFV1 150 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 PTBP2Q9UKA9 531 aaKnown RBP12.85□□□□□ -0.35
BRAT1-205ENST00000473879 SATB2Q9UPW6 733 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 STK38LQ9Y2H1 464 aa12.85□□□□□ -0.35
BRAT1-205ENST00000473879 ACACAQ13085 2346 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 PKD1L2Q7Z442 2459 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 A0A087WV48 116 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 CCDC187A0A096LP49 1063 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 A0A1W2PNU3 283 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-205ENST00000473879 OR5K4A6NMS3 321 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 ZNF839A8K0R7 811 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 MLYCDO95822 493 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 TROVE2P10155 538 aaKnown RBP eCLIP12.84□□□□□ -0.35
BRAT1-205ENST00000473879 F3P13726 295 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 NDUFS1P28331 727 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 ALDH4A1P30038 563 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 MLLT3P42568 568 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-205ENST00000473879 SEC24CP53992 1094 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 INHBCP55103 352 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 OR1D5P58170 312 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 ERVPABLB-1P60509 514 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 OCRLQ01968 901 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 GALNT1Q10472 559 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-205ENST00000473879 EIF3IQ13347 325 aaKnown RBP12.84□□□□□ -0.35
BRAT1-205ENST00000473879 SQSTM1Q13501 440 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 KRT33BQ14525 404 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 C3orf38Q5JPI3 329 aa12.84□□□□□ -0.35
BRAT1-205ENST00000473879 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-205ENST00000473879 ABRAXAS1Q6UWZ7 409 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms