RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 ESRRAP11474 423 aaPredicted RBP17.21■□□□□ 0.35
CHCHD3-203ENST00000448878 MAGEA1P43355 309 aa17.21■□□□□ 0.35
CHCHD3-203ENST00000448878 TNFSF10P50591 281 aa17.21■□□□□ 0.35
CHCHD3-203ENST00000448878 CASP6P55212 293 aa17.21■□□□□ 0.35
CHCHD3-203ENST00000448878 EEF1A2Q05639 463 aaKnown RBP17.21■□□□□ 0.35
CHCHD3-203ENST00000448878 TCEAL1Q15170 157 aa17.21■□□□□ 0.35
CHCHD3-203ENST00000448878 ZNF630Q2M218 657 aaPredicted RBP17.21■□□□□ 0.35
CHCHD3-203ENST00000448878 TTC23LQ6PF05 361 aa17.21■□□□□ 0.35
CHCHD3-203ENST00000448878 CNSTQ6PJW8 725 aa17.21■□□□□ 0.35
CHCHD3-203ENST00000448878 TAB3Q8N5C8 712 aaPredicted RBP17.21■□□□□ 0.35
CHCHD3-203ENST00000448878 HAS2Q92819 552 aa17.21■□□□□ 0.35
CHCHD3-203ENST00000448878 TRIM56Q9BRZ2 755 aaKnown RBP17.21■□□□□ 0.35
CHCHD3-203ENST00000448878 FAM169AQ9Y6X4 670 aa17.21■□□□□ 0.35
CHCHD3-203ENST00000448878 SNRNP200O75643 2136 aaKnown RBP17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 MYO7BQ6PIF6 2116 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 A0A0J9YVX5 310 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 PTMAP06454 111 aaKnown RBP17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 ERVK-10P10266 1014 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 EMP2P54851 167 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 INAQ16352 499 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 CCDC38Q502W7 563 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 PACS1Q6VY07 963 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 RPTNQ6XPR3 784 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 NDUFAF7Q7L592 441 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 LAPTM4BQ86VI4 370 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 VRK3Q8IV63 474 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 DCUN1D3Q8IWE4 304 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 OR2L8Q8NGY9 312 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 TSSK1BQ9BXA7 367 aa17.2■□□□□ 0.34
CHCHD3-203ENST00000448878 PDZD2O15018 2839 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 CCDC162PA2VCL2 907 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 CBFA2T2O43439 604 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 SRPX2O60687 465 aaPredicted RBP17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 MYBL2P10244 700 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 FBLP22087 321 aaKnown RBP17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 MST1P26927 711 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 CCR7P32248 378 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 CA7P43166 264 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 COPS2P61201 443 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 PARP6Q2NL67 630 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 ATG9BQ674R7 924 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 FRMPD2BQ6IN97 320 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 XKRXQ6PP77 449 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 SLC22A15Q8IZD6 547 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 GSDMBQ8TAX9 411 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 SKA2Q8WVK7 121 aaPredicted RBP17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 ASZ1Q8WWH4 475 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 ZUFSPQ96AP4 578 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 MIPEPQ99797 713 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 OSBPL8Q9BZF1 889 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 LRRC40Q9H9A6 602 aa17.19■□□□□ 0.34
CHCHD3-203ENST00000448878 IQCF5A8MTL0 148 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 TARM1B6A8C7 271 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 RASGRF2O14827 1237 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 FFAR3O14843 346 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 GPR42O15529 346 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 CTSVO60911 334 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 MFAP3LO75121 409 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 MED26O95402 600 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 WDPCPO95876 746 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 SERPINA7P05543 415 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 APOA4P06727 396 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 CELA2AP08217 269 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 COX6A1P12074 109 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 FDXRP22570 491 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 FOXN2P32314 431 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 CETN2P41208 172 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 PRMT9Q6P2P2 845 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 PIAS4Q8N2W9 510 aaPredicted RBP17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 RAB42Q8N4Z0 105 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 DNAAF3Q8N9W5 541 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 DNAJB8Q8NHS0 232 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 PSMF1Q92530 271 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 HDAC10Q969S8 669 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 CABS1Q96KC9 395 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 ABI3Q9P2A4 366 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 TRPC4Q9UBN4 977 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 TFR2Q9UP52 801 aa17.18■□□□□ 0.34
CHCHD3-203ENST00000448878 LOC105369274A0A096LPK9 316 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 LOC102723532A0A0G2JNH3 316 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 FITM1A5D6W6 292 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 IDSB3KWA1 339 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 PJA2O43164 708 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 BMP10O95393 424 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 METTL18O95568 372 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 HEXBP07686 556 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 PSMB5P28074 263 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 SOX11P35716 441 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 HADHBP55084 474 aaKnown RBP17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 MUM1Q2TAK8 710 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.17■□□□□ 0.344e-7■■□□□ 13.4
CHCHD3-203ENST00000448878 ABHD17BQ5VST6 288 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 KCTD11Q693B1 232 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 OR4N4Q8N0Y3 316 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 FAM71DQ8N9W8 422 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 OR6P1Q8NGX9 317 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 MENTQ9BUN1 341 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 RAB11FIP5Q9BXF6 653 aa17.17■□□□□ 0.34
CHCHD3-203ENST00000448878 FAM227AF5H4B4 570 aa17.16■□□□□ 0.34
CHCHD3-203ENST00000448878 TJP3O95049 919 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms