RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 CCR5P51681 352 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 RPL38P63173 70 aaKnown RBP17.57■□□□□ 0.4
VIM-201ENST00000224237 DOC2AQ14183 400 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 ENPP7Q6UWV6 458 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 GCNT7Q6ZNI0 430 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 TMEM145Q8NBT3 493 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 TSPEARQ8WU66 669 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 MTFMTQ96DP5 389 aaKnown RBP17.57■□□□□ 0.4
VIM-201ENST00000224237 TOE1Q96GM8 510 aaKnown RBP17.57■□□□□ 0.4
VIM-201ENST00000224237 CLPTM1LQ96KA5 538 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 C12orf66Q96MD2 445 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 NELL2Q99435 816 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 DENND2DQ9H6A0 471 aaPredicted RBP17.57■□□□□ 0.4
VIM-201ENST00000224237 C6orf106Q9H6K1 298 aaPredicted RBP17.57■□□□□ 0.4
VIM-201ENST00000224237 LRTM1Q9HBL6 345 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 SPATA7Q9P0W8 599 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 PRPF19Q9UMS4 504 aaKnown RBP17.57■□□□□ 0.4
VIM-201ENST00000224237 WDR37Q9Y2I8 494 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 CFAP20Q9Y6A4 193 aaKnown RBP17.57■□□□□ 0.4
VIM-201ENST00000224237 ZNF839A8K0R7 811 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 H0YIV9 168 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 NR5A2O00482 541 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 SCAMP1O15126 338 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 ZNF217O75362 1048 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 CIB2O75838 187 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 SLC2A4P14672 509 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 CD22P20273 847 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 PRPH2P23942 346 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 TSTA3Q13630 321 aaPredicted RBP17.56■□□□□ 0.4
VIM-201ENST00000224237 C6orf163Q5TEZ5 329 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 KIAA0895LQ68EN5 471 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 TMPRSS11BQ86T26 416 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 FRMD1Q8N878 549 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 NEIL2Q969S2 332 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 PDXPQ96GD0 296 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 C1orf109Q9NX04 203 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 SLC7A8Q9UHI5 535 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 EIF3LQ9Y262 564 aaKnown RBP17.56■□□□□ 0.4
VIM-201ENST00000224237 POLR3HQ9Y535 204 aaPredicted RBP17.56■□□□□ 0.4
VIM-201ENST00000224237 NPIPB8E9PQR5 432 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 PRAMEF26H0Y7S4 382 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 FBP2O00757 339 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 TNFRSF10CO14798 259 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 SLC22A3O75751 556 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 IGHV4-34P06331 123 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 NPPBP16860 134 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 CD6P30203 668 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 THOP1P52888 689 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 CSTF3Q12996 717 aaKnown RBP17.56■□□□□ 0.4
VIM-201ENST00000224237 PRKG2Q13237 762 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 RCAN2Q14206 197 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 IL23RQ5VWK5 629 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 BLOC1S3Q6QNY0 202 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 NET1Q7Z628 596 aaPredicted RBP17.56■□□□□ 0.4
VIM-201ENST00000224237 ZFAND4Q86XD8 727 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 RAB42Q8N4Z0 105 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 WDR20Q8TBZ3 569 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 SETD7Q8WTS6 366 aaKnown RBP17.56■□□□□ 0.4
VIM-201ENST00000224237 TPSD1Q9BZJ3 242 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 EHD1Q9H4M9 534 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 WDR41Q9HAD4 459 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 EBF2Q9HAK2 575 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 ASIC5Q9NY37 505 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 WSB2Q9NYS7 404 aaPredicted RBP17.56■□□□□ 0.4
VIM-201ENST00000224237 DMTF1Q9Y222 760 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 NDUFAF1Q9Y375 327 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 PCDHGA11Q9Y5H2 935 aa17.56■□□□□ 0.4
VIM-201ENST00000224237 MRASO14807 208 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 ANGPT2O15123 496 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 SEC22BO75396 215 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 G6PDP11413 515 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 NEK2P51955 445 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 KCNK10P57789 538 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 LRP8Q14114 963 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 UAP1L1Q3KQV9 507 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 COQ5Q5HYK3 327 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 PGM2L1Q6PCE3 622 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 CYP20A1Q6UW02 462 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 SUSD1Q6UWL2 747 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 LCTLQ6UWM7 567 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 SLCO4C1Q6ZQN7 724 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 PCYOX1LQ8NBM8 494 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 SLC5A11Q8WWX8 675 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 OR1E3Q8WZA6 343 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 WDR34Q96EX3 536 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 IL17FQ96PD4 163 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 INSM2Q96T92 566 aaPredicted RBP17.55■□□□□ 0.4
VIM-201ENST00000224237 SERPINI1Q99574 410 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 PLAGL1Q9UM63 463 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 PLEKHM1Q9Y4G2 1056 aa17.55■□□□□ 0.4
VIM-201ENST00000224237 PDZK1P1A8MUH7 402 aa17.54■□□□□ 0.4
VIM-201ENST00000224237 NUDT1P36639 197 aa17.54■□□□□ 0.4
VIM-201ENST00000224237 RABIFP47224 123 aa17.54■□□□□ 0.4
VIM-201ENST00000224237 UFM1P61960 85 aa17.54■□□□□ 0.4
VIM-201ENST00000224237 CTBSQ01459 385 aa17.54■□□□□ 0.4
VIM-201ENST00000224237 CYP2A13Q16696 494 aa17.54■□□□□ 0.4
VIM-201ENST00000224237 TRMT5Q32P41 509 aaKnown RBP17.54■□□□□ 0.4
VIM-201ENST00000224237 PRAMEF14Q5SWL7 426 aa17.54■□□□□ 0.4
VIM-201ENST00000224237 TPRG1LQ5T0D9 272 aa17.54■□□□□ 0.4
VIM-201ENST00000224237 THEMIS2Q5TEJ8 643 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms