RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 NACC2Q96BF6 587 aa18.33■□□□□ 0.52
CCDC28A-203ENST00000617445 FER1L6-AS2Q96M78 137 aa18.33■□□□□ 0.52
CCDC28A-203ENST00000617445 IL17FQ96PD4 163 aa18.33■□□□□ 0.52
CCDC28A-203ENST00000617445 SPATA7Q9P0W8 599 aa18.33■□□□□ 0.52
CCDC28A-203ENST00000617445 KLK4Q9Y5K2 254 aa18.33■□□□□ 0.52
CCDC28A-203ENST00000617445 TNRC6AQ8NDV7 1962 aaKnown RBP18.33■□□□□ 0.52
CCDC28A-203ENST00000617445 SRPX2O60687 465 aaPredicted RBP18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 MATN4O95460 622 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 ONECUT2O95948 504 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 CHRM3P20309 590 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 COILP38432 576 aaPredicted RBP18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 FOLR3P41439 243 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 VPS41P49754 854 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 CHAF1BQ13112 559 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 GBX1Q14549 363 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 C1orf189Q5VU69 101 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 TTC27Q6P3X3 843 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 CCDC137Q6PK04 289 aaKnown RBP18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 CILP2Q8IUL8 1156 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 LMNTD2Q8IXW0 634 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 OR2Y1Q8NGV0 311 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 GRK7Q8WTQ7 553 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 PTERQ96BW5 349 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 IL1RAPL1Q9NZN1 696 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 KLHL42Q9P2K6 505 aa18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 DHCR7Q9UBM7 475 aaKnown RBP18.32■□□□□ 0.52
CCDC28A-203ENST00000617445 GOLGA8KD6RF30 607 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 GOLGA8TH3BQL2 631 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 PGRMC1O00264 195 aaKnown RBP18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 PEX12O00623 359 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 AVILO75366 819 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 ALBP02768 609 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 PDGFAP04085 211 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 PKMP14618 531 aaKnown RBP18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 GCGRP47871 477 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 CD97P48960 835 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 DHX34Q14147 1143 aaKnown RBP18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 GRM7Q14831 915 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 IGFBP7Q16270 282 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 CYP2A13Q16696 494 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 FAM214AQ32MH5 1076 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 ANKRD20A4Q4UJ75 823 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 FCRL6Q6DN72 434 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 MRPL14Q6P1L8 145 aaKnown RBP18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 ATCAYQ86WG3 371 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 C2orf73Q8N5S3 287 aaPredicted RBP18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 MIB2Q96AX9 1013 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 FKBP10Q96AY3 582 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 ZNF285Q96NJ3 590 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 FAM114A2Q9NRY5 505 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 CRYL1Q9Y2S2 319 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 PTRH2Q9Y3E5 179 aaKnown RBP18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 NFS1Q9Y697 457 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 DOPEY2Q9Y3R5 2298 aa18.31■□□□□ 0.52
CCDC28A-203ENST00000617445 GOLGA6L10A0A0M3HER8 536 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 A0A1B0GX78 115 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 E5RI56 91 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 ZSCAN12O43309 604 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 DPM1O60762 260 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 NIPSNAP2O75323 286 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 ALAS2P22557 587 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 OTX2P32243 289 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 HSD17B2P37059 387 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 GRIA3P42263 894 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 ATP1A4Q13733 1029 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 THOC5Q13769 683 aaKnown RBP18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 ARHGAP19Q14CB8 494 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 TTLL9Q3SXZ7 439 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 FAM69BQ5VUD6 431 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 ANKRD22Q5VYY1 191 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 CNSTQ6PJW8 725 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 NEK10Q6ZWH5 1172 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 CENPUQ71F23 418 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 MRGPREQ86SM8 312 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 TAX1BP1Q86VP1 789 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 FAM20CQ8IXL6 584 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 CALML6Q8TD86 181 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 ACTRT1Q8TDG2 376 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 MS4A14Q96JA4 679 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 SELENOSQ9BQE4 189 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 GPR83Q9NYM4 423 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 C5AR2Q9P296 337 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 CIDEBQ9UHD4 219 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 KLHL20Q9Y2M5 609 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 NEU2Q9Y3R4 380 aa18.3■□□□□ 0.52
CCDC28A-203ENST00000617445 CTAGE9A4FU28 777 aa18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 FITM1A5D6W6 292 aa18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 ZNF839A8K0R7 811 aa18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 CES2O00748 559 aa18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 DSCR3O14972 297 aa18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 ZNF185O15231 689 aa18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 CTSBP07858 339 aa18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 BDKRB1P46663 353 aa18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 FNTAP49354 379 aa18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 TERF1P54274 439 aa18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 TTLL10Q6ZVT0 673 aa18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 TTC29Q8NA56 475 aaPredicted RBP18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 CLEC1AQ8NC01 280 aa18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 FDCSPQ8NFU4 85 aa18.29■□□□□ 0.52
CCDC28A-203ENST00000617445 OR2L3Q8NG85 312 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms