RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 NCF4Q15080 339 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 PTPRRQ15256 657 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 ANKRD20A4Q4UJ75 823 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 VWA2Q5GFL6 755 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 DCAF10Q5QP82 559 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 LDLRAP1Q5SW96 308 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 PLEKHS1Q5SXH7 462 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 FNBP1LQ5T0N5 605 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 FAM182AQ5T1J6 154 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 GPR26Q8NDV2 337 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 DDHD1Q8NEL9 900 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 PPP4R1Q8TF05 950 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 FAR1Q8WVX9 515 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 RELTQ969Z4 430 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 ZNF501Q96CX3 271 aaPredicted RBP9.9□□□□□ -0.82
SDF2-209ENST00000591903 CLIP3Q96DZ5 547 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 DNAJC1Q96KC8 554 aaKnown RBP9.9□□□□□ -0.82
SDF2-209ENST00000591903 TCF12Q99081 682 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 WDR77Q9BQA1 342 aaPredicted RBP9.9□□□□□ -0.82
SDF2-209ENST00000591903 C17orf62Q9BQA9 187 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 ZCCHC2Q9C0B9 1178 aaKnown RBP9.9□□□□□ -0.82
SDF2-209ENST00000591903 ZNF552Q9H707 407 aaPredicted RBP9.9□□□□□ -0.82
SDF2-209ENST00000591903 ANKZF1Q9H8Y5 726 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 SYTL2Q9HCH5 934 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 TRIM39Q9HCM9 518 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 CHRAC1Q9NRG0 131 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 NSMCE4AQ9NXX6 385 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 ATXN10Q9UBB4 475 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 SUCOQ9UBS9 1254 aaKnown RBP9.9□□□□□ -0.82
SDF2-209ENST00000591903 RAB21Q9UL25 225 aa9.9□□□□□ -0.82
SDF2-209ENST00000591903 CNTRLQ7Z7A1 2325 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 IGLV3-16A0A075B6K0 115 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 A0A0U1RQS6 177 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 ESYT3A0FGR9 886 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 FADS2P1A8MWK0 482 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 C9J4A7 227 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 PEX12O00623 359 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 AVILO75366 819 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 PRAMEF1O95521 474 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 ZBTB11O95625 1053 aaPredicted RBP9.89□□□□□ -0.83
SDF2-209ENST00000591903 CD63P08962 238 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 RHOXF2BP0C7M4 288 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 ZNF7P17097 686 aaPredicted RBP9.89□□□□□ -0.83
SDF2-209ENST00000591903 VCLP18206 1134 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 IDSP22304 550 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 FOXN2P32314 431 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 ELK3P41970 407 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 HALP42357 657 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 ARCN1P48444 511 aaKnown RBP9.89□□□□□ -0.83
SDF2-209ENST00000591903 TTPAP49638 278 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 SOX8P57073 446 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 PDIA2Q13087 525 aaKnown RBP9.89□□□□□ -0.83
SDF2-209ENST00000591903 NAB1Q13506 487 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 SSPNQ14714 243 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 PLCL1Q15111 1095 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 SEPT7Q16181 437 aaKnown RBP9.89□□□□□ -0.83
SDF2-209ENST00000591903 LONRF1Q17RB8 773 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 ZNF630Q2M218 657 aaPredicted RBP9.89□□□□□ -0.83
SDF2-209ENST00000591903 BBS9Q3SYG4 887 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 MSS51Q4VC12 460 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 RNF187Q5TA31 235 aaPredicted RBP9.89□□□□□ -0.83
SDF2-209ENST00000591903 B3GNTL1Q67FW5 361 aaPredicted RBP9.89□□□□□ -0.83
SDF2-209ENST00000591903 MRNIPQ6NTE8 343 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 MTFR2Q6P444 385 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 CASC4Q6P4E1 433 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 FAM198BQ6UWH4 519 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 PACS1Q6VY07 963 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 KIAA0408Q6ZU52 694 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 MRGPREQ86SM8 312 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 LRRTM4Q86VH4 590 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 CNTN4Q8IWV2 1026 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 PARP9Q8IXQ6 854 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 SYTL1Q8IYJ3 562 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 AGGF1Q8N302 714 aaeCLIP9.89□□□□□ -0.83
SDF2-209ENST00000591903 ZNF808Q8N4W9 903 aaPredicted RBP9.89□□□□□ -0.83
SDF2-209ENST00000591903 SLC38A9Q8NBW4 561 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 OR13C4Q8NGS5 318 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 OR4L1Q8NH43 312 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 GSDMBQ8TAX9 411 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 GRHL3Q8TE85 626 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 PYROXD1Q8WU10 500 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 ITLN2Q8WWU7 325 aaPredicted RBP9.89□□□□□ -0.83
SDF2-209ENST00000591903 GLYATL1Q969I3 302 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 TRAPPC9Q96Q05 1148 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 MAP3K3Q99759 626 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 RHOXF2Q9BQY4 288 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 FAM167BQ9BTA0 163 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 TRIM8Q9BZR9 551 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 OR2AG1Q9H205 316 aa9.89□□□□□ -0.83
SDF2-209ENST00000591903 ZC3H7BQ9UGR2 993 aaKnown RBP9.89□□□□□ -0.83
SDF2-209ENST00000591903 OR52A4PA6NMU1 304 aa9.88□□□□□ -0.83
SDF2-209ENST00000591903 KCNJ13O60928 360 aa9.88□□□□□ -0.83
SDF2-209ENST00000591903 SLC25A14O95258 325 aaPredicted RBP9.88□□□□□ -0.83
SDF2-209ENST00000591903 CAPN1P07384 714 aa9.88□□□□□ -0.83
SDF2-209ENST00000591903 ABHD2P08910 425 aa9.88□□□□□ -0.83
SDF2-209ENST00000591903 RALBP11234 206 aa9.88□□□□□ -0.83
SDF2-209ENST00000591903 BRAFP15056 766 aa9.88□□□□□ -0.83
SDF2-209ENST00000591903 CD1EP15812 388 aa9.88□□□□□ -0.83
SDF2-209ENST00000591903 AGXTP21549 392 aa9.88□□□□□ -0.83
SDF2-209ENST00000591903 ARNTP27540 789 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms