RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 SPHK1Q9NYA1 384 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 NUDT4Q9NZJ9 180 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 DCDC2Q9UHG0 476 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 TK2O00142 265 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 NTN3O00634 580 aaPredicted RBP14.47□□□□□ -0.09
NUP54-213ENST00000513352 SMIM24O75264 130 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 SPAG7O75391 227 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 HOXB3P14651 431 aaPredicted RBP14.47□□□□□ -0.09
NUP54-213ENST00000513352 UGT2B7P16662 529 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 CDH3P22223 829 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 PSMB5P28074 263 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 CCT5P48643 541 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 TBPL1P62380 186 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 CDKL1Q00532 357 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 CFHR1Q03591 330 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 KIR2DS3Q14952 304 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 N4BP2L1Q5TBK1 243 aaPredicted RBP14.47□□□□□ -0.09
NUP54-213ENST00000513352 TMEM71Q6P5X7 295 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 WDR74Q6RFH5 385 aaPredicted RBP14.47□□□□□ -0.09
NUP54-213ENST00000513352 TMPRSS9Q7Z410 1059 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 TRIM73Q86UV7 250 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 LCA5Q86VQ0 697 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 RHEBL1Q8TAI7 183 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 SLC22A18Q96BI1 424 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 PGM2Q96G03 612 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 APOPT1Q96IL0 206 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 CCDC74BQ96LY2 380 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 GPR78Q96P69 363 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 ATOH8Q96SQ7 321 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 MRPL57Q9BQC6 102 aaKnown RBP14.47□□□□□ -0.09
NUP54-213ENST00000513352 MRPL46Q9H2W6 279 aaKnown RBP14.47□□□□□ -0.09
NUP54-213ENST00000513352 ACBD3Q9H3P7 528 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 CCDC177Q9NQR7 707 aaPredicted RBP14.47□□□□□ -0.09
NUP54-213ENST00000513352 TMEM216Q9P0N5 145 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 SENP1Q9P0U3 644 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 POMT2Q9UKY4 750 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 ENTPD2Q9Y5L3 495 aa14.47□□□□□ -0.09
NUP54-213ENST00000513352 SNRNP200O75643 2136 aaKnown RBP14.47□□□□□ -0.09
NUP54-213ENST00000513352 MN1Q10571 1320 aaPredicted RBP14.46□□□□□ -0.09
NUP54-213ENST00000513352 CCDC189A1A4V9 331 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 MT-CO3P00414 261 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 ERGP11308 486 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 OAS2P29728 719 aaKnown RBP14.46□□□□□ -0.09
NUP54-213ENST00000513352 PEBP1P30086 187 aaKnown RBP14.46□□□□□ -0.09
NUP54-213ENST00000513352 KCNC1P48547 511 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 INHBCP55103 352 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 SLC18A2Q05940 514 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 SF1Q15637 639 aaKnown RBP14.46□□□□□ -0.09
NUP54-213ENST00000513352 CLPPQ16740 277 aaPredicted RBP14.46□□□□□ -0.09
NUP54-213ENST00000513352 C18orf21Q32NC0 220 aaPredicted RBP14.46□□□□□ -0.09
NUP54-213ENST00000513352 FBXO48Q5FWF7 155 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 CACHD1Q5VU97 1274 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 SULT1C3Q6IMI6 304 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 SPESP1Q6UW49 350 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 B3GNT8Q7Z7M8 397 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 TCAIMQ8N3R3 496 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 FBXO39Q8N4B4 442 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 OR4D9Q8NGE8 314 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 PYCR2Q96C36 320 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 TMEM74Q96NL1 305 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 DEPDC7Q96QD5 511 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 MAP3K3Q99759 626 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 MIPEPQ99797 713 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 KLHL25Q9H0H3 589 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 SEMA6CQ9H3T2 930 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 VIPAS39Q9H9C1 493 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 TMBIM4Q9HC24 238 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 TAC3Q9UHF0 121 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 GRID1Q9ULK0 1009 aa14.46□□□□□ -0.09
NUP54-213ENST00000513352 IGHV5-10-1A0A0J9YXX1 117 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 TLCD2A6NGC4 264 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 E7ENX8 843 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 KIF1CO43896 1103 aaKnown RBP14.45□□□□□ -0.1
NUP54-213ENST00000513352 CCNT2O60583 730 aaKnown RBP14.45□□□□□ -0.1
NUP54-213ENST00000513352 CSO75390 466 aaKnown RBP14.45□□□□□ -0.1
NUP54-213ENST00000513352 WDR47O94967 919 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 JUPP14923 745 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 TAC1P20366 129 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 PRDX3P30048 256 aaKnown RBP14.45□□□□□ -0.1
NUP54-213ENST00000513352 CRHR1P34998 444 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 HSPA7P48741 367 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 ARL4DP49703 201 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 SEPHS1P49903 392 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 HNMTP50135 292 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 TAP2Q03519 686 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 SQSTM1Q13501 440 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 PFKFB4Q16877 469 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 PRAMEF13Q5VWM6 474 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 CAPN13Q6MZZ7 669 aaPredicted RBP14.45□□□□□ -0.1
NUP54-213ENST00000513352 CDHR3Q6ZTQ4 885 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 FAM20CQ8IXL6 584 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 BANPQ8N9N5 519 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 PDPRQ8NCN5 879 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 RCBTB1Q8NDN9 531 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 HMGCLL1Q8TB92 370 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 RHBDF1Q96CC6 855 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 PPM1MQ96MI6 270 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 OR2A14Q96R47 310 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 CD180Q99467 661 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 RAB33BQ9H082 229 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms