RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 TMEM164Q5U3C3 297 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 SUSD1Q6UWL2 747 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 CMC1Q7Z7K0 106 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 ZFAND4Q86XD8 727 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 KMT5CQ86Y97 462 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 CARFQ8N187 725 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 D2HGDHQ8N465 521 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 NKAPQ8N5F7 415 aaKnown RBP13.11□□□□□ -0.31
FDPS-219ENST00000495308 FBXO15Q8NCQ5 510 aaPredicted RBP13.11□□□□□ -0.31
FDPS-219ENST00000495308 SNIP1Q8TAD8 396 aaKnown RBP13.11□□□□□ -0.31
FDPS-219ENST00000495308 ZNF480Q8WV37 535 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 TSPAN17Q96FV3 270 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 DDA1Q9BW61 102 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 FUT8Q9BYC5 575 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 POPDC3Q9HBV1 291 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 FBXO8Q9NRD0 319 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 ABCF3Q9NUQ8 709 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 LNPEPQ9UIQ6 1025 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 BTRCQ9Y297 605 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 PKD1L2Q7Z442 2459 aa13.11□□□□□ -0.31
FDPS-219ENST00000495308 MDC1Q14676 2089 aaKnown RBP13.1□□□□□ -0.31
FDPS-219ENST00000495308 A0A087WUV0 522 aaPredicted RBP13.1□□□□□ -0.31
FDPS-219ENST00000495308 A0A1W2PPV9 198 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 NPEPPSL1A6NEC2 478 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 POC1B-GALNT4F8VUJ3 575 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 PRICKLE3O43900 615 aaPredicted RBP13.1□□□□□ -0.31
FDPS-219ENST00000495308 WISP3O95389 354 aaPredicted RBP13.1□□□□□ -0.31
FDPS-219ENST00000495308 MAGP20916 626 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 TNFRSF8P28908 595 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 IMPA1P29218 277 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 OAS2P29728 719 aaKnown RBP13.1□□□□□ -0.31
FDPS-219ENST00000495308 PMS2P54278 862 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 PNLIPRP1P54315 467 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 RAB10P61026 200 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 YBX1P67809 324 aaKnown RBP13.1□□□□□ -0.31
FDPS-219ENST00000495308 ILF2Q12905 390 aaKnown RBP13.1□□□□□ -0.31
FDPS-219ENST00000495308 SF1Q15637 639 aaKnown RBP13.1□□□□□ -0.31
FDPS-219ENST00000495308 ZKSCAN8Q15776 578 aaPredicted RBP13.1□□□□□ -0.31
FDPS-219ENST00000495308 ZIC1Q15915 447 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 SLC5A12Q1EHB4 618 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 DEFB110Q30KQ9 67 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 TMTC4Q5T4D3 741 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 MROH9Q5TGP6 573 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 CEACAM20Q6UY09 585 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 SYTL1Q8IYJ3 562 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 SPATA6LQ8N4H0 392 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 C19orf47Q8N9M1 422 aaKnown RBP13.1□□□□□ -0.31
FDPS-219ENST00000495308 HMGCLL1Q8TB92 370 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 PAFAH2Q99487 392 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 MIPEPQ99797 713 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 ACAT2Q9BWD1 397 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 SLC12A9Q9BXP2 914 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 TXLNGYQ9BZA5 131 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 PARVBQ9HBI1 364 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 SYTL2Q9HCH5 934 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 PDE7BQ9NP56 450 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 FGF21Q9NSA1 209 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 WDR70Q9NW82 654 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.1□□□□□ -0.31
FDPS-219ENST00000495308 PCDHB11Q9Y5F2 797 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 PCDHGA3Q9Y5H0 932 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 MGAQ8IWI9 3026 aa13.1□□□□□ -0.31
FDPS-219ENST00000495308 URB1O60287 2271 aaKnown RBP13.09□□□□□ -0.31
FDPS-219ENST00000495308 AHCTF1Q8WYP5 2266 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 HMX2A2RU54 273 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 SRRM3A6NNA2 597 aaPredicted RBP13.09□□□□□ -0.31
FDPS-219ENST00000495308 SLC16A5O15375 505 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 RIPK2O43353 540 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 HCRTR1O43613 425 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 CCDC166P0CW27 439 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 RPA3P35244 121 aaPredicted RBP13.09□□□□□ -0.31
FDPS-219ENST00000495308 EIF2S3P41091 472 aaKnown RBP13.09□□□□□ -0.31
FDPS-219ENST00000495308 VSNL1P62760 191 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 ARHGAP19Q14CB8 494 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 TGIF1Q15583 401 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 KIAA1614Q5VZ46 1190 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 SBSNQ6UWP8 590 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 CDHR3Q6ZTQ4 885 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 RAPH1Q70E73 1250 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 TRMT10CQ7L0Y3 403 aaKnown RBP13.09□□□□□ -0.31
FDPS-219ENST00000495308 ZNF248Q8NDW4 579 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 OR2A1Q8NGT9 310 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 MCOLN3Q8TDD5 553 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 SLC44A1Q8WWI5 657 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 SMPDL3AQ92484 453 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 SLC22A18Q96BI1 424 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 ZNF501Q96CX3 271 aaPredicted RBP13.09□□□□□ -0.31
FDPS-219ENST00000495308 PDLIM5Q96HC4 596 aaKnown RBP13.09□□□□□ -0.31
FDPS-219ENST00000495308 ASPSCR1Q9BZE9 553 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 EPB41L4BQ9H329 900 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 FAM60AQ9NP50 221 aa13.09□□□□□ -0.31
FDPS-219ENST00000495308 UTP6Q9NYH9 597 aaKnown RBP13.09□□□□□ -0.31
FDPS-219ENST00000495308 STOX2Q9P2F5 926 aaPredicted RBP13.09□□□□□ -0.31
FDPS-219ENST00000495308 ATMQ13315 3056 aa13.08□□□□□ -0.32
FDPS-219ENST00000495308 TEX51A0A1B0GUA7 166 aa13.08□□□□□ -0.32
FDPS-219ENST00000495308 EXOC1LA0A1B0GW35 172 aa13.08□□□□□ -0.32
FDPS-219ENST00000495308 PABPN1LA6NDY0 278 aaKnown RBP13.08□□□□□ -0.32
FDPS-219ENST00000495308 TMEM150CB9EJG8 249 aa13.08□□□□□ -0.32
FDPS-219ENST00000495308 E7ENX8 843 aa13.08□□□□□ -0.32
FDPS-219ENST00000495308 NRP2O60462 931 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms