RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 TCAIMQ8N3R3 496 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 LILRA3Q8N6C8 439 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-205ENST00000473879 PTGR2Q8N8N7 351 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-205ENST00000473879 PDPRQ8NCN5 879 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 MAGEC3Q8TD91 643 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 MCOLN3Q8TDD5 553 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 CHMP6Q96FZ7 201 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 EGFL8Q99944 293 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 OR52A5Q9H2C5 316 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 LRRN3Q9H3W5 708 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 PARVBQ9HBI1 364 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 SLC23A2Q9UGH3 650 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 ADAMTS6Q9UKP5 1117 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 PLEKHM1Q9Y4G2 1056 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 ENTPD2Q9Y5L3 495 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 RNF215Q9Y6U7 377 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 A0A1W2PQM1 296 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 TCP11X1B4DZS4 312 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 KLK8O60259 260 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 SNUPNO95149 360 aaKnown RBP12.88□□□□□ -0.35
BRAT1-205ENST00000473879 RPLP0P05388 317 aaKnown RBP12.88□□□□□ -0.35
BRAT1-205ENST00000473879 VIMP08670 466 aaKnown RBP12.88□□□□□ -0.35
BRAT1-205ENST00000473879 ANXA5P08758 320 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 MTHFD2P13995 350 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 PDHA2P29803 388 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 KCNC1P48547 511 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 HERVK_113P63132 956 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 ABRQ12979 859 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 NR1D2Q14995 579 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 PFKFB4Q16877 469 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 CFAP157Q5JU67 520 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 SULT1C3Q6IMI6 304 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 TTC23LQ6PF05 361 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 ZNF438Q7Z4V0 828 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 RASGRP3Q8IV61 690 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 ARL14Q8N4G2 192 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 FBXO15Q8NCQ5 510 aaPredicted RBP12.88□□□□□ -0.35
BRAT1-205ENST00000473879 CFAP61Q8NHU2 1237 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 PHF21BQ96EK2 531 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 L3HYPDHQ96EM0 354 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 GFM1Q96RP9 751 aaKnown RBP12.88□□□□□ -0.35
BRAT1-205ENST00000473879 ERVK-6Q9BXR3 956 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 ARL15Q9NXU5 204 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 UTP6Q9NYH9 597 aaKnown RBP12.88□□□□□ -0.35
BRAT1-205ENST00000473879 PSD3Q9NYI0 1048 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 PDE10AQ9Y233 779 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 KCNK6Q9Y257 313 aa12.88□□□□□ -0.35
BRAT1-205ENST00000473879 TNPO3Q9Y5L0 923 aaKnown RBP12.88□□□□□ -0.35
BRAT1-205ENST00000473879 KNTC1P50748 2209 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 GMNCA6NCL1 334 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 NCF1BA6NI72 391 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-205ENST00000473879 PDZK1P1A8MUH7 402 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 NCF1CA8MVU1 366 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-205ENST00000473879 TMX2-CTNND1H3BSU7 103 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 CASC3O15234 703 aaKnown RBP12.87□□□□□ -0.35
BRAT1-205ENST00000473879 ZW10O43264 779 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 BRINP1O60477 761 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 NPHS1O60500 1241 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 DXOO77932 396 aaKnown RBP12.87□□□□□ -0.35
BRAT1-205ENST00000473879 NCF1P14598 390 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-205ENST00000473879 IMPDH1P20839 514 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 ACADLP28330 430 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 HALP42357 657 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 LSSP48449 732 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 HNMTP50135 292 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 PDX1P52945 283 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 MAZP56270 477 aaKnown RBP12.87□□□□□ -0.35
BRAT1-205ENST00000473879 BST1Q10588 318 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 SETDB1Q15047 1291 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 PHKG1Q16816 387 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 METTL2BQ6P1Q9 378 aaKnown RBP12.87□□□□□ -0.35
BRAT1-205ENST00000473879 ZCCHC23Q6ZST2 131 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 SPRED1Q7Z699 444 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 LSMEM2Q8N112 164 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 OR6Y1Q8NGX8 325 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 PPP4R1Q8TF05 950 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 UBTD2Q8WUN7 234 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 ATL1Q8WXF7 558 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 TFGQ92734 400 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-205ENST00000473879 TMEM237Q96Q45 408 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 TRMOQ9BU70 441 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 GATA5Q9BWX5 397 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-205ENST00000473879 WWP1Q9H0M0 922 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 EPN3Q9H201 632 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 SYNDIG1Q9H7V2 258 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 POLR1BQ9H9Y6 1135 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 THAP1Q9NVV9 213 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 WWOXQ9NZC7 414 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 ASF1AQ9Y294 204 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 RAXQ9Y2V3 346 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 HEBP2Q9Y5Z4 205 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 DMXL2Q8TDJ6 3036 aa12.87□□□□□ -0.35
BRAT1-205ENST00000473879 RHPN2P1A8MT19 583 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 ARHGEF33A8MVX0 844 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 D6RAR5 112 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 SNNO75324 88 aaPredicted RBP12.86□□□□□ -0.35
BRAT1-205ENST00000473879 C1orf105O95561 183 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 HSPA4LO95757 839 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 EML2O95834 649 aa12.86□□□□□ -0.35
BRAT1-205ENST00000473879 GUCA1CO95843 209 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms