RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 CTAGE6Q86UF2 777 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 BPHLQ86WA6 291 aaPredicted RBP12.44□□□□□ -0.42
COL5A1-206ENST00000465877 TMEM126BQ8IUX1 230 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 CTAGE4Q8IX94 777 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 FAM20CQ8IXL6 584 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 FBXO15Q8NCQ5 510 aaPredicted RBP12.44□□□□□ -0.42
COL5A1-206ENST00000465877 OR9A1PQ8NGU1 263 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 OR1L3Q8NH93 324 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 KIF18AQ8NI77 898 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 SEC14L1Q92503 715 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 LINGO1Q96FE5 620 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 FCRL4Q96PJ5 515 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 OLFM1Q99784 485 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 FAM60AQ9NP50 221 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 SMYD2Q9NRG4 433 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 NSMCE4AQ9NXX6 385 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 LOC101059948A0A1B0GTJ6 334 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 FAM95CA0A1B0GW59 222 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 EFSO43281 561 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 FKBP9O95302 570 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 MT-ND3P03897 115 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 OAS2P29728 719 aaKnown RBP12.43□□□□□ -0.42
COL5A1-206ENST00000465877 SKIV2L2P42285 1042 aaKnown RBP12.43□□□□□ -0.42
COL5A1-206ENST00000465877 ITGA1P56199 1179 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 GUCY2DQ02846 1103 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 SP140Q13342 867 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 ZIC1Q15915 447 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 CYP2A13Q16696 494 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 PAQR3Q6TCH7 311 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 C6orf15Q6UXA7 325 aaPredicted RBP12.43□□□□□ -0.42
COL5A1-206ENST00000465877 UBE2R2Q712K3 238 aaPredicted RBP12.43□□□□□ -0.42
COL5A1-206ENST00000465877 STRA8Q7Z7C7 330 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 ZC3HC1Q86WB0 502 aaKnown RBP12.43□□□□□ -0.42
COL5A1-206ENST00000465877 PALM2Q8IXS6 379 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 MYO1HQ8N1T3 1032 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 MMGT1Q8N4V1 131 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 ASB11Q8WXH4 323 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 CDKL2Q92772 493 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 KIAA1143Q96AT1 154 aaPredicted RBP12.43□□□□□ -0.42
COL5A1-206ENST00000465877 TCTN2Q96GX1 697 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 CHRNA10Q9GZZ6 450 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 GPN2Q9H9Y4 310 aaPredicted RBP12.43□□□□□ -0.42
COL5A1-206ENST00000465877 ZDHHC18Q9NUE0 388 aa12.43□□□□□ -0.42
COL5A1-206ENST00000465877 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.43□□□□□ -0.42
COL5A1-206ENST00000465877 SPENQ96T58 3664 aaKnown RBP12.42□□□□□ -0.42
COL5A1-206ENST00000465877 A0A1W2PPV9 198 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 GFYI3L273 518 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 ZBTB14O43829 449 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 PRICKLE3O43900 615 aaPredicted RBP12.42□□□□□ -0.42
COL5A1-206ENST00000465877 PIAS1O75925 651 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 TSPAN12O95859 305 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 SLC16A8O95907 504 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 SYF2O95926 243 aaKnown RBP12.42□□□□□ -0.42
COL5A1-206ENST00000465877 C1QAP02745 245 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 NTRK1P04629 796 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 ZNF37AP17032 561 aaPredicted RBP12.42□□□□□ -0.42
COL5A1-206ENST00000465877 CYP2A7P20853 494 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 GABRA4P48169 554 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 PGGT1BP53609 377 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 PNLIPRP1P54315 467 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 GPX6P59796 221 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 FASTKQ14296 549 aaKnown RBP12.42□□□□□ -0.42
COL5A1-206ENST00000465877 ZNF460Q14592 562 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 ARHGAP19Q14CB8 494 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 SF1Q15637 639 aaKnown RBP12.42□□□□□ -0.42
COL5A1-206ENST00000465877 KIAA1614Q5VZ46 1190 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 CYHR1Q6ZMK1 362 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 OR2L3Q8NG85 312 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 EEF1AKMT1Q8WVE0 214 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 N4BP2L2Q92802 583 aaPredicted RBP12.42□□□□□ -0.42
COL5A1-206ENST00000465877 VPS39Q96JC1 886 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 PKP4Q99569 1192 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 MCMBPQ9BTE3 642 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 RHOJQ9H4E5 214 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 INTS7Q9NVH2 962 aaKnown RBP12.42□□□□□ -0.42
COL5A1-206ENST00000465877 DMGDHQ9UI17 866 aaKnown RBP12.42□□□□□ -0.42
COL5A1-206ENST00000465877 CROTQ9UKG9 612 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 ADAMTS6Q9UKP5 1117 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 KLHL20Q9Y2M5 609 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 PCDHB3Q9Y5E6 796 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 CACNA1GO43497 2377 aa12.42□□□□□ -0.42
COL5A1-206ENST00000465877 FAM159BA6NKW6 160 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 ZNF839A8K0R7 811 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 CXorf49A8MYA2 514 aaPredicted RBP12.41□□□□□ -0.42
COL5A1-206ENST00000465877 E7EQ34 232 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 HCRTR1O43613 425 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 C8GP07360 202 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 GSTA2P09210 222 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 IMPA1P29218 277 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 STX2P32856 288 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 DLSTP36957 453 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 HSD17B2P37059 387 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 MAGEA4P43358 317 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 GPS2Q13227 327 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 TSTA3Q13630 321 aaPredicted RBP12.41□□□□□ -0.42
COL5A1-206ENST00000465877 PRAMEF17Q5VTA0 474 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 SUSD1Q6UWL2 747 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 SYTL1Q8IYJ3 562 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 GPR135Q8IZ08 494 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 CEP112Q8N8E3 955 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms