RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 PXYLP1Q8TE99 480 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 PRKD2Q9BZL6 878 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 TBC1D17Q9HA65 648 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 TAS2R9Q9NYW1 312 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 DNAJC27Q9NZQ0 273 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 CXXC1Q9P0U4 656 aaPredicted RBP8.62□□□□□ -1.03
RTN4-206ENST00000394611 LAMA3Q16787 3333 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 TRAV6A0A075B6T7 132 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 TLL1O43897 1013 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 NOS1APO75052 506 aaPredicted RBP8.62□□□□□ -1.03
RTN4-206ENST00000394611 GPX3P22352 226 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 GKP32189 559 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 PFKPQ01813 784 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 SIRPB2Q5JXA9 342 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 STEAP4Q687X5 459 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 KIAA1841Q6NSI8 718 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 DEF8Q6ZN54 512 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 LRRC49Q8IUZ0 686 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 CENPIQ92674 756 aaPredicted RBP8.62□□□□□ -1.03
RTN4-206ENST00000394611 TMEM125Q96AQ2 219 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 COPS8Q99627 209 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 AP5M1Q9H0R1 490 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 ASB8Q9H765 288 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 DNAJB9Q9UBS3 223 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 PCDHB14Q9Y5E9 798 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 BBIP1A8MTZ0 92 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 E9PAM4 449 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 STBD1O95210 358 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 IL1BP01584 269 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 C1QAP02745 245 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 RGS4P49798 205 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 RPS7P62081 194 aaKnown RBP8.62□□□□□ -1.03
RTN4-206ENST00000394611 BCL2L1Q07817 233 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 C5orf22Q49AR2 442 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 CCDC58Q4VC31 144 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 WDR45BQ5MNZ6 344 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 VN1R5Q7Z5H4 357 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 LMNTD1Q8N9Z9 388 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 LEMD2Q8NC56 503 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 MAELQ96JY0 434 aaKnown RBP8.62□□□□□ -1.03
RTN4-206ENST00000394611 NEDD4LQ96PU5 975 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 WACQ9BTA9 647 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 DYRK4Q9NR20 520 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 IGSF5Q9NSI5 407 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 TRPC4Q9UBN4 977 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 RABL2BQ9UNT1 228 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 PCDHGA11Q9Y5H2 935 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 WWP2O00308 870 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 SLC22A1O15245 554 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 SGTAO43765 313 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 OR10H3O60404 316 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 EPN2O95208 641 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 STATHP02808 62 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 ALPIP09923 528 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 TGFB3P10600 412 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 ARNTP27540 789 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 DCKP27707 260 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 SMSP52788 366 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 DUSP28Q4G0W2 176 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 ALFQ53S48 1182 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 BORAQ6PGQ7 559 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 RFPL4BQ6ZWI9 263 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 SHFQ7M4L6 423 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 CILP2Q8IUL8 1156 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 SLAIN1Q8ND83 568 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 NETO1Q8TDF5 533 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 SMARCD1Q96GM5 515 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 TBX5Q99593 518 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 GAL3ST1Q99999 423 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 TDRD1Q9BXT4 1180 aaKnown RBP8.62□□□□□ -1.03
RTN4-206ENST00000394611 CIPCQ9C0C6 399 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 ADAMTS10Q9H324 1103 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 CD84Q9UIB8 345 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 VPS28Q9UK41 221 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 FBXW11Q9UKB1 542 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 ITGB1BP2Q9UKP3 347 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 STYXL1Q9Y6J8 313 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 AP1G1O43747 822 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 ERN1O75460 977 aaKnown RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 CREG1O75629 220 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 EIF2S1P05198 315 aaKnown RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 EPORP19235 508 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 RPS3P23396 243 aaKnown RBP eCLIP8.61□□□□□ -1.033e-16■■□□□ 11.6
RTN4-206ENST00000394611 NNMTP40261 264 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 RNF144AP50876 292 aaPredicted RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 PRMT2P55345 433 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 ARHGAP1Q07960 439 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 ABRAXAS2Q15018 415 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 ATP13A5Q4VNC0 1218 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 USP39Q53GS9 565 aaKnown RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 SETMARQ53H47 684 aaPredicted RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 SMUG1Q53HV7 270 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 INTS11Q5TA45 600 aaKnown RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 TIGD7Q6NT04 549 aaPredicted RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 PROSER1Q86XN7 944 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 KBTBD8Q8NFY9 601 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 OR13F1Q8NGS4 319 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 PKP4Q99569 1192 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 NIFKQ9BYG3 293 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms