RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 CCR5P51681 352 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 GTF2H3Q13889 308 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 VPS26BQ4G0F5 336 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 KIAA0895LQ68EN5 471 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 DOK6Q6PKX4 331 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 RNF111Q6ZNA4 994 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 TRAPPC5Q8IUR0 188 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 FNDC5Q8NAU1 212 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 PCYOX1LQ8NBM8 494 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 TEX37Q96LM6 180 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 RNF11Q9Y3C5 154 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 POM121BA6NF01 834 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 C9JVG2 144 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 K7ESF4 209 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 HIST1H2AGP0C0S8 130 aaPredicted RBP21.99■■□□□ 1.11
CDX1-201ENST00000231656 MYCLP1P12525 358 aaPredicted RBP21.99■■□□□ 1.11
CDX1-201ENST00000231656 HIST1H2ADP20671 130 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 MSX2P35548 267 aaPredicted RBP21.99■■□□□ 1.11
CDX1-201ENST00000231656 AP1S2P56377 157 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 EMX2Q04743 252 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 RCAN2Q14206 197 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 COQ5Q5HYK3 327 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 TLDC1Q6P9B6 456 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 LAYNQ6UX15 382 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 ZNF547Q8IVP9 402 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 FOXJ1Q92949 421 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 ZNF514Q96K75 400 aaPredicted RBP21.99■■□□□ 1.11
CDX1-201ENST00000231656 HIST1H2AHQ96KK5 128 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 ZNF570Q96NI8 536 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 HBEGFQ99075 208 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 HIST1H2AJQ99878 128 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 GPATCH1Q9BRR8 931 aaKnown RBP21.99■■□□□ 1.11
CDX1-201ENST00000231656 CCM2Q9BSQ5 444 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 H2AFJQ9BTM1 129 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 APOOQ9BUR5 198 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 SPAG4Q9NPE6 437 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 TMEM45AQ9NWC5 275 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 ZIM2Q9NZV7 527 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 TMEM181Q9P2C4 612 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 GPR34Q9UPC5 381 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 H3BNX3 289 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 ACOT8O14734 319 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 NVLO15381 856 aaKnown RBP21.98■■□□□ 1.11
CDX1-201ENST00000231656 BCAS2O75934 225 aaPredicted RBP21.98■■□□□ 1.11
CDX1-201ENST00000231656 BAG2O95816 211 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 GSTM1P09488 218 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 CCR3P51677 355 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 CLDN2P57739 230 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 UFM1P61960 85 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 GSTM4Q03013 218 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 FLOT2Q14254 428 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 MAMSTRQ6ZN01 415 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 GLMNQ92990 594 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 BIRC7Q96CA5 298 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 SLC29A3Q9BZD2 475 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 MRPL40Q9NQ50 206 aaKnown RBP21.98■■□□□ 1.11
CDX1-201ENST00000231656 SUCOQ9UBS9 1254 aaKnown RBP21.98■■□□□ 1.11
CDX1-201ENST00000231656 CA5BQ9Y2D0 317 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 EML5Q05BV3 1969 aa21.98■■□□□ 1.11
CDX1-201ENST00000231656 SLC5A10A0PJK1 596 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 FPGTO14772 594 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 ANGPT2O15123 496 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 NR6A1Q15406 480 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 ZNF658BQ4V348 819 aaPredicted RBP21.97■■□□□ 1.11
CDX1-201ENST00000231656 MCOLN3Q8TDD5 553 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 SPDL1Q96EA4 605 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 BMFQ96LC9 184 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 CD300AQ9UGN4 299 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 PCYT1BQ9Y5K3 369 aaPredicted RBP21.97■■□□□ 1.11
CDX1-201ENST00000231656 GON4LQ3T8J9 2241 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 PLXND1Q9Y4D7 1925 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 A0A1W2PP18 115 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 H0Y8X5 98 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 MANBAO00462 879 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 FFAR3O14843 346 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 GPR42O15529 346 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 MAP3K7O43318 606 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 PSIP1O75475 530 aaKnown RBP21.97■■□□□ 1.11
CDX1-201ENST00000231656 SLC22A3O75751 556 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 CLDN9O95484 217 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 AKT2P31751 481 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 TAF11Q15544 211 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 SYTL3Q4VX76 610 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 CMPK2Q5EBM0 449 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 CRTC3Q6UUV7 619 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 TRIM46Q7Z4K8 759 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 USP7Q93009 1102 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 GULP1Q9UBP9 304 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 FAM8A1Q9UBU6 413 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 KLQ9UEF7 1012 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 BCAP29Q9UHQ4 241 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 MCM8Q9UJA3 840 aa21.97■■□□□ 1.11
CDX1-201ENST00000231656 ASPDHA6ND91 283 aa21.96■■□□□ 1.11
CDX1-201ENST00000231656 PABPN1LA6NDY0 278 aaKnown RBP21.96■■□□□ 1.11
CDX1-201ENST00000231656 PRORSD1PA6NEY8 169 aa21.96■■□□□ 1.11
CDX1-201ENST00000231656 FXYD1O00168 92 aa21.96■■□□□ 1.11
CDX1-201ENST00000231656 PBLDP30039 288 aaPredicted RBP21.96■■□□□ 1.11
CDX1-201ENST00000231656 AP5B1Q2VPB7 878 aa21.96■■□□□ 1.11
CDX1-201ENST00000231656 PTCHD3Q3KNS1 767 aa21.96■■□□□ 1.11
CDX1-201ENST00000231656 DHDDSQ86SQ9 333 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms