RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 TPPP3Q9BW30 176 aa4.28□□□□□ -1.72
LINC01539-206ENST00000593282 FSD1LQ9BXM9 530 aa4.28□□□□□ -1.72
LINC01539-206ENST00000593282 PUS3Q9BZE2 481 aaKnown RBP4.28□□□□□ -1.72
LINC01539-206ENST00000593282 MTMR12Q9C0I1 747 aa4.28□□□□□ -1.72
LINC01539-206ENST00000593282 RAB33BQ9H082 229 aa4.28□□□□□ -1.72
LINC01539-206ENST00000593282 RPF1Q9H9Y2 349 aaKnown RBP4.28□□□□□ -1.72
LINC01539-206ENST00000593282 PALMDQ9NP74 551 aa4.28□□□□□ -1.72
LINC01539-206ENST00000593282 PPANQ9NQ55 473 aaKnown RBP4.28□□□□□ -1.72
LINC01539-206ENST00000593282 TRPV5Q9NQA5 729 aa4.28□□□□□ -1.72
LINC01539-206ENST00000593282 SERTAD4Q9NUC0 356 aa4.28□□□□□ -1.72
LINC01539-206ENST00000593282 DDX18Q9NVP1 670 aaKnown RBP4.28□□□□□ -1.72
LINC01539-206ENST00000593282 IPO11Q9UI26 975 aaKnown RBP4.28□□□□□ -1.72
LINC01539-206ENST00000593282 COL11A2P13942 1736 aaPredicted RBP4.28□□□□□ -1.72
LINC01539-206ENST00000593282 KDM5AP29375 1690 aaKnown RBP4.28□□□□□ -1.72
LINC01539-206ENST00000593282 ROBO1Q9Y6N7 1651 aa4.28□□□□□ -1.72
LINC01539-206ENST00000593282 NCAPD2Q15021 1401 aa4.28□□□□□ -1.72
LINC01539-206ENST00000593282 CNTLNQ9NXG0 1405 aa4.28□□□□□ -1.72
LINC01539-206ENST00000593282 NWD1Q149M9 1564 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 E9PCH4 1651 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 ERVK-7P63135 1459 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 FAM230AA0A1W2PPH8 454 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 XKRY2A2RUG3 117 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 EME2A4GXA9 379 aaPredicted RBP4.27□□□□□ -1.73
LINC01539-206ENST00000593282 CXorf65A6NEN9 183 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 DDTLA6NHG4 134 aaPredicted RBP4.27□□□□□ -1.73
LINC01539-206ENST00000593282 H0YIZ8 118 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 NDUFS4O43181 175 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 PPIP5K2O43314 1243 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 MSI1O43347 362 aaKnown RBP4.27□□□□□ -1.73
LINC01539-206ENST00000593282 NUDT21O43809 227 aaKnown RBP4.27□□□□□ -1.73
LINC01539-206ENST00000593282 HSF2BPO75031 334 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 ATP2C2O75185 946 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 SCGB2A1O75556 95 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 BBOX1O75936 387 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 EPN2O95208 641 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 MT-CO3P00414 261 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 PCCBP05166 539 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 NPSP0C0P6 89 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 NDUFB7P17568 137 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 HNRNPA2B1P22626 353 aaKnown RBP4.27□□□□□ -1.73
LINC01539-206ENST00000593282 PSMA5P28066 241 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 PTPN4P29074 926 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 GPR12P47775 334 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 TRPC1P48995 793 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 RGS7P49802 495 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 CACNA2D1P54289 1103 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 CDK3Q00526 305 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 ARHGAP1Q07960 439 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 ABRQ12979 859 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 PKP1Q13835 747 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 GIT2Q14161 759 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 ZNF169Q14929 603 aaPredicted RBP4.27□□□□□ -1.73
LINC01539-206ENST00000593282 NR1D2Q14995 579 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 IMMTQ16891 758 aaKnown RBP4.27□□□□□ -1.73
LINC01539-206ENST00000593282 XKR9Q5GH70 373 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 PLAC9Q5JTB6 97 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 PRAMEF19Q5SWL8 479 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 CES5AQ6NT32 575 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 FIGLAQ6QHK4 219 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 CES3Q6UWW8 571 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 ARSKQ6UWY0 536 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 BCDIN3DQ7Z5W3 292 aaKnown RBP4.27□□□□□ -1.73
LINC01539-206ENST00000593282 ZNF573Q86YE8 665 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 AQP12AQ8IXF9 295 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 KLHDC8AQ8IYD2 350 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 GPT2Q8TD30 523 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 ACTRT2Q8TDY3 377 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 SMG7Q92540 1137 aaKnown RBP4.27□□□□□ -1.73
LINC01539-206ENST00000593282 WASF1Q92558 559 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 FIG4Q92562 907 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 PIGKQ92643 395 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 GIMAP5Q96F15 307 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 COG3Q96JB2 828 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 MMS19Q96T76 1030 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 GTPBP2Q9BX10 602 aaKnown RBP4.27□□□□□ -1.73
LINC01539-206ENST00000593282 SLC29A3Q9BZD2 475 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 TSPYL1Q9H0U9 437 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 CDT1Q9H211 546 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 TMEM245Q9H330 911 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 RMND5AQ9H871 391 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 MAGEF1Q9HAY2 307 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 KCNMB3Q9NPA1 279 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.27□□□□□ -1.73
LINC01539-206ENST00000593282 SMPD3Q9NY59 655 aaPredicted RBP4.27□□□□□ -1.73
LINC01539-206ENST00000593282 TFCP2L1Q9NZI6 479 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 TBC1D7Q9P0N9 293 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 RNF7Q9UBF6 113 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 OR14J1Q9UGF5 321 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 SLC8A2Q9UPR5 921 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 EXOC6BQ9Y2D4 811 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 NFE2L3Q9Y4A8 694 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 KIAA1107Q9UPP5 1409 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 DISP3Q9P2K9 1392 aa4.27□□□□□ -1.73
LINC01539-206ENST00000593282 EFCAB6Q5THR3 1501 aa4.26□□□□□ -1.73
LINC01539-206ENST00000593282 TTC21BQ7Z4L5 1316 aa4.26□□□□□ -1.73
LINC01539-206ENST00000593282 CHD2O14647 1828 aaKnown RBP4.26□□□□□ -1.73
LINC01539-206ENST00000593282 PLEKHH2Q8IVE3 1493 aa4.26□□□□□ -1.73
LINC01539-206ENST00000593282 NRXN3Q9Y4C0 1643 aa4.26□□□□□ -1.73
LINC01539-206ENST00000593282 A0A096LPK6 155 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms