RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 NAE1Q13564 534 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 PTK2BQ14289 1009 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 IMPG1Q17R60 797 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 AGKQ53H12 422 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 CYB5D1Q6P9G0 228 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 FAM83HQ6ZRV2 1179 aaPredicted RBP13.4□□□□□ -0.26
TPM1-215ENST00000558868 TRIM46Q7Z4K8 759 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 MYLK4Q86YV6 388 aaPredicted RBP13.4□□□□□ -0.26
TPM1-215ENST00000558868 ADHFE1Q8IWW8 467 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 SETD7Q8WTS6 366 aaKnown RBP13.4□□□□□ -0.26
TPM1-215ENST00000558868 TFGQ92734 400 aaPredicted RBP13.4□□□□□ -0.26
TPM1-215ENST00000558868 MED8Q96G25 268 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 SCARF2Q96GP6 870 aaPredicted RBP13.4□□□□□ -0.26
TPM1-215ENST00000558868 MIPEPQ99797 713 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 MRPL1Q9BYD6 325 aaKnown RBP13.4□□□□□ -0.26
TPM1-215ENST00000558868 ZDHHC5Q9C0B5 715 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 ATG10Q9H0Y0 220 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 KLQ9UEF7 1012 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 SLC23A2Q9UGH3 650 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 PRDM4Q9UKN5 801 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 FBXL21Q9UKT6 434 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 ASF1AQ9Y294 204 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 RNF11Q9Y3C5 154 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 PRKAB1Q9Y478 270 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 HS3ST3A1Q9Y663 406 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 KCNE2Q9Y6J6 123 aa13.4□□□□□ -0.26
TPM1-215ENST00000558868 MYO10Q9HD67 2058 aa13.4□□□□□ -0.27
TPM1-215ENST00000558868 KANSL1LA0AUZ9 987 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 SERTM1A2A2V5 107 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 BBIP1A8MTZ0 92 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 PI15O43692 258 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 ZNF217O75362 1048 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 SLC16A8O95907 504 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 ALDOCP09972 364 aaKnown RBP13.39□□□□□ -0.27
TPM1-215ENST00000558868 JUPP14923 745 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 IL9P15248 144 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 GNAZP19086 355 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 EPORP19235 508 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 IDSP22304 550 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 ACSL1P33121 698 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 HALP42357 657 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 STARD6P59095 220 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 IRF8Q02556 426 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 ART3Q13508 389 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 RIPK1Q13546 671 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 GRB7Q14451 532 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 NFATC4Q14934 902 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 ARHGAP19Q14CB8 494 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 NR6A1Q15406 480 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 C6orf136Q5SQH8 315 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 C6orf163Q5TEZ5 329 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 XKR5Q6UX68 686 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 LPCAT2Q7L5N7 544 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 CHST15Q7LFX5 561 aaPredicted RBP13.39□□□□□ -0.27
TPM1-215ENST00000558868 SYTL1Q8IYJ3 562 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 ZNF687Q8N1G0 1237 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 DCBLD1Q8N8Z6 715 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 FNDC5Q8NAU1 212 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 KYQ8NBH2 561 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 TSTD1Q8NFU3 115 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 TSPEARQ8WU66 669 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 USP7Q93009 1102 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 UTP4Q969X6 686 aaKnown RBP13.39□□□□□ -0.27
TPM1-215ENST00000558868 PYCR2Q96C36 320 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 NECAB3Q96P71 396 aaPredicted RBP13.39□□□□□ -0.27
TPM1-215ENST00000558868 TRIT1Q9H3H1 467 aaKnown RBP13.39□□□□□ -0.27
TPM1-215ENST00000558868 ELOVL6Q9H5J4 265 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 SDR39U1Q9NRG7 319 aaPredicted RBP13.39□□□□□ -0.27
TPM1-215ENST00000558868 AIG1Q9NVV5 245 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 SPATA7Q9P0W8 599 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 MOSPD1Q9UJG1 213 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 ZNF490Q9ULM2 529 aaPredicted RBP13.39□□□□□ -0.27
TPM1-215ENST00000558868 DMTF1Q9Y222 760 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 DYRK1BQ9Y463 629 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 PTGDR2Q9Y5Y4 395 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 REV3LO60673 3130 aa13.39□□□□□ -0.27
TPM1-215ENST00000558868 ZFC3H1O60293 1989 aaKnown RBP13.38□□□□□ -0.27
TPM1-215ENST00000558868 TNFRSF10CO14798 259 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 FFAR3O14843 346 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 GPR42O15529 346 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 LATO43561 262 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 MGRN1O60291 552 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 KDM1AO60341 852 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 CIB2O75838 187 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 ACP5P13686 325 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 GPX3P22352 226 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 CPOXP36551 454 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 CASP2P42575 452 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 HTR6P50406 440 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 RAP1GDS1P52306 607 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 CHIT1Q13231 466 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 ABRAXAS2Q15018 415 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 MMEL1Q495T6 779 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 PDCD4Q53EL6 469 aaKnown RBP13.38□□□□□ -0.27
TPM1-215ENST00000558868 PYCR3Q53H96 274 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 XKR6Q5GH73 641 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 TCHHL1Q5QJ38 904 aaPredicted RBP13.38□□□□□ -0.27
TPM1-215ENST00000558868 WASHC2DQ5SRD0 308 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 C10orf62Q5T681 223 aaPredicted RBP13.38□□□□□ -0.27
TPM1-215ENST00000558868 KIAA0895LQ68EN5 471 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms