RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 KRT33BQ14525 404 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 ZKSCAN8Q15776 578 aaPredicted RBP17.59■□□□□ 0.41
VEGFA-222ENST00000520948 AMZ1Q400G9 498 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 PHF19Q5T6S3 580 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 LRRC8EQ6NSJ5 796 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 WDR74Q6RFH5 385 aaPredicted RBP17.59■□□□□ 0.41
VEGFA-222ENST00000520948 FBXO15Q8NCQ5 510 aaPredicted RBP17.59■□□□□ 0.41
VEGFA-222ENST00000520948 CFAP61Q8NHU2 1237 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 DCAKDQ8WVC6 231 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 JPH3Q8WXH2 748 aaPredicted RBP17.59■□□□□ 0.41
VEGFA-222ENST00000520948 PAFAH2Q99487 392 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 ARHGAP9Q9BRR9 750 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 CAB39LQ9H9S4 337 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 EPHA6Q9UF33 1036 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 FETUBQ9UGM5 382 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 ZNF180Q9UJW8 692 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 ACSL6Q9UKU0 697 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 SLC39A10Q9ULF5 831 aa17.59■□□□□ 0.41
VEGFA-222ENST00000520948 RUVBL2Q9Y230 463 aaKnown RBP17.59■□□□□ 0.41
VEGFA-222ENST00000520948 NVLO15381 856 aaKnown RBP17.58■□□□□ 0.4
VEGFA-222ENST00000520948 C9P02748 559 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 RPN2P04844 631 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 ZNF37AP17032 561 aaPredicted RBP17.58■□□□□ 0.4
VEGFA-222ENST00000520948 CSF2RBP32927 897 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 IL2P60568 153 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 NFKB2Q00653 900 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 USP10Q14694 798 aaKnown RBP17.58■□□□□ 0.4
VEGFA-222ENST00000520948 MAP9Q49MG5 647 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 CCSMST1Q4G0I0 132 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 MANEAQ5SRI9 462 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 TMEM71Q6P5X7 295 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 EMBQ6PCB8 327 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 PIWIL4Q7Z3Z4 852 aaKnown RBP17.58■□□□□ 0.4
VEGFA-222ENST00000520948 SLITRK4Q8IW52 837 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 DCUN1D3Q8IWE4 304 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 OR4E2Q8NGC2 313 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 RSC1A1Q92681 617 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 USP7Q93009 1102 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 CAVIN3Q969G5 261 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 MRRFQ96E11 262 aaKnown RBP17.58■□□□□ 0.4
VEGFA-222ENST00000520948 FOPNLQ96NB1 174 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 DPYSL5Q9BPU6 564 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 NUDT22Q9BRQ3 303 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 HGH1Q9BTY7 390 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 FAM117AQ9C073 453 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 SEMA6CQ9H3T2 930 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 RDH14Q9HBH5 336 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 SYTL2Q9HCH5 934 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 ICKQ9UPZ9 632 aa17.58■□□□□ 0.4
VEGFA-222ENST00000520948 HEMK1Q9Y5R4 338 aaPredicted RBP17.58■□□□□ 0.4
VEGFA-222ENST00000520948 POC1B-GALNT4F8VUJ3 575 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 DUX1O43812 170 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 WISP1O95388 367 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 FAM87AP0C7U9 286 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 TYRP1P17643 537 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 SAT1P21673 171 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 CCNFP41002 786 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 MSH2P43246 934 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 MAPK9P45984 424 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 RGS4P49798 205 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 ZNF460Q14592 562 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 ADGRD1Q6QNK2 874 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 ADGRF3Q8IZF5 1079 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 NKAPQ8N5F7 415 aaKnown RBP17.57■□□□□ 0.4
VEGFA-222ENST00000520948 OR4D9Q8NGE8 314 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 SKA2Q8WVK7 121 aaPredicted RBP17.57■□□□□ 0.4
VEGFA-222ENST00000520948 ANKRD49Q8WVL7 239 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 LCN9Q8WX39 176 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 ANKRD7Q92527 254 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 NCSTNQ92542 709 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 DLG3Q92796 817 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 RAD51AP1Q96B01 352 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 TSPAN17Q96FV3 270 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 AHCYL2Q96HN2 611 aaKnown RBP17.57■□□□□ 0.4
VEGFA-222ENST00000520948 UBXN10Q96LJ8 280 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 CMKLR1Q99788 373 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.57■□□□□ 0.4
VEGFA-222ENST00000520948 PCDHGA4Q9Y5G9 962 aa17.57■□□□□ 0.4
VEGFA-222ENST00000520948 AHCTF1Q8WYP5 2266 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 MN1Q10571 1320 aaPredicted RBP17.56■□□□□ 0.4
VEGFA-222ENST00000520948 IGHV5-10-1A0A0J9YXX1 117 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 EXOC1LA0A1B0GW35 172 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 OR5K3A6NET4 321 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 ARHGEF33A8MVX0 844 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 C9orf172C9J069 976 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 BTN3A3O00478 584 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 INHBAP08476 426 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 STMN1P16949 149 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 AMD1P17707 334 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 WT1P19544 449 aaPredicted RBP17.56■□□□□ 0.4
VEGFA-222ENST00000520948 HSD17B3P37058 310 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 BDKRB1P46663 353 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 CAPZBP47756 277 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 SERPINB9P50453 376 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 RAB10P61026 200 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 CYP4F2P78329 520 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 C16orf72Q14CZ0 275 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 PLCL1Q15111 1095 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.56■□□□□ 0.4
VEGFA-222ENST00000520948 AMIGO1Q86WK6 493 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms