RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 VOPP1Q96AW1 172 aa17.9■□□□□ 0.46
SDC2-202ENST00000518385 ASIC4Q96FT7 647 aa17.9■□□□□ 0.46
SDC2-202ENST00000518385 CCDC115Q96NT0 180 aa17.9■□□□□ 0.46
SDC2-202ENST00000518385 FAM83CQ9BQN1 747 aa17.9■□□□□ 0.46
SDC2-202ENST00000518385 OSBPL10Q9BXB5 764 aa17.9■□□□□ 0.46
SDC2-202ENST00000518385 UGT2B28Q9BY64 529 aa17.9■□□□□ 0.46
SDC2-202ENST00000518385 RAD21L1Q9H4I0 556 aa17.9■□□□□ 0.46
SDC2-202ENST00000518385 HMG20AQ9NP66 347 aa17.9■□□□□ 0.46
SDC2-202ENST00000518385 POLG2Q9UHN1 485 aa17.9■□□□□ 0.46
SDC2-202ENST00000518385 ERVW-1Q9UQF0 538 aa17.9■□□□□ 0.46
SDC2-202ENST00000518385 DOCK8Q8NF50 2099 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 GAPDHSO14556 408 aaPredicted RBP17.89■□□□□ 0.45
SDC2-202ENST00000518385 HOXC11O43248 304 aaPredicted RBP17.89■□□□□ 0.45
SDC2-202ENST00000518385 OR1I1O60431 355 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 MRPS14O60783 128 aaKnown RBP17.89■□□□□ 0.45
SDC2-202ENST00000518385 CRCPO75575 148 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 SLC22A3O75751 556 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 TSPAN12O95859 305 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 ADH1CP00326 375 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 NTRK1P04629 796 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 THRBP10828 461 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 LAMP2P13473 410 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 BPIP17213 487 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 CDH3P22223 829 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 ACRV1P26436 265 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 CLCN7P51798 805 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 ARSFP54793 590 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 ERVK-8P63133 956 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 SMU1Q2TAY7 513 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 RFX4Q33E94 735 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 XKR7Q5GH72 579 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 PTRHD1Q6GMV3 140 aaKnown RBP17.89■□□□□ 0.45
SDC2-202ENST00000518385 VITQ6UXI7 678 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 GDPD4Q6W3E5 623 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 MACC1Q6ZN28 852 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 DPY19L3Q6ZPD9 716 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 C8orf59Q8N0T1 100 aaPredicted RBP17.89■□□□□ 0.45
SDC2-202ENST00000518385 ULK4Q96C45 1275 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 ING2Q9H160 280 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 FBRSL1Q9HCM7 1045 aaKnown RBP17.89■□□□□ 0.45
SDC2-202ENST00000518385 LATS2Q9NRM7 1088 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 RAD18Q9NS91 495 aa17.89■□□□□ 0.45
SDC2-202ENST00000518385 SOX1O00570 391 aaPredicted RBP17.88■□□□□ 0.45
SDC2-202ENST00000518385 NIPSNAP2O75323 286 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 NFATC1O95644 943 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 RPS17P08708 135 aaKnown RBP17.88■□□□□ 0.45
SDC2-202ENST00000518385 ADH5P11766 374 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 ZNF30P17039 623 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 GKP32189 559 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 RGS4P49798 205 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 BMXP51813 675 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 CLCQ05315 142 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 FCHO2Q0JRZ9 810 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 PDGFRLQ15198 375 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 PTPRRQ15256 657 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 PFKFB4Q16877 469 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 FAM151BQ6UXP7 276 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 SMRP1Q8NCR6 262 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 PIK3C3Q8NEB9 887 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 MAGEE2Q8TD90 523 aaPredicted RBP17.88■□□□□ 0.45
SDC2-202ENST00000518385 FUBP1Q96AE4 644 aaKnown RBP17.88■□□□□ 0.45
SDC2-202ENST00000518385 FBXL20Q96IG2 436 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 CCDC138Q96M89 665 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 SLC30A3Q99726 388 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 HEPHQ9BQS7 1158 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 SLC39A3Q9BRY0 314 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 ANKHQ9HCJ1 492 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 EGFL7Q9UHF1 273 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 CRLS1Q9UJA2 301 aa17.88■□□□□ 0.45
SDC2-202ENST00000518385 TSPAN11A1L157 253 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 SUPT3HB4E1H0 165 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 SNX2O60749 519 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 SUPT3HO75486 399 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 ECI2O75521 394 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 SEC24DO94855 1032 aaPredicted RBP17.87■□□□□ 0.45
SDC2-202ENST00000518385 CISD3P0C7P0 127 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 CYP2A6P11509 494 aaPredicted RBP17.87■□□□□ 0.45
SDC2-202ENST00000518385 ARSAP15289 507 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 ITIH1P19827 911 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 OXTRP30559 389 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 POLR2JP52435 117 aaKnown RBP17.87■□□□□ 0.45
SDC2-202ENST00000518385 NR1D2Q14995 579 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 TSNQ15631 228 aaKnown RBP17.87■□□□□ 0.45
SDC2-202ENST00000518385 FGD3Q5JSP0 725 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 NCCRP1Q6ZVX7 275 aaPredicted RBP17.87■□□□□ 0.45
SDC2-202ENST00000518385 ADAMTSL2Q86TH1 951 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 ZSWIM9Q86XI8 627 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 GPSM1Q86YR5 675 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 NXPE1Q8N323 547 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 SIDT2Q8NBJ9 832 aaKnown RBP17.87■□□□□ 0.45
SDC2-202ENST00000518385 ZNF555Q8NEP9 628 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 OR8J3Q8NGG0 315 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 DNAJB8Q8NHS0 232 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 ELSPBP1Q96BH3 223 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 BIRC7Q96CA5 298 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 LINGO1Q96FE5 620 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 VMP1Q96GC9 406 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 NECTIN4Q96NY8 510 aa17.87■□□□□ 0.45
SDC2-202ENST00000518385 GAS2L1Q99501 681 aaPredicted RBP17.87■□□□□ 0.45
SDC2-202ENST00000518385 CHID1Q9BWS9 393 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms