RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 L3MBTL4Q8NA19 623 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 CEP76Q8TAP6 659 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 AGAP11Q8TF27 550 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 EXT2Q93063 718 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 LOXL4Q96JB6 756 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 C12orf66Q96MD2 445 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 CAMK1GQ96NX5 476 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 MIPEPQ99797 713 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 ELAC2Q9BQ52 826 aaKnown RBP12.38□□□□□ -0.43
TRAF4-208ENST00000469529 PCBD2Q9H0N5 130 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 DNAJC11Q9NVH1 559 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 INTS7Q9NVH2 962 aaKnown RBP12.38□□□□□ -0.43
TRAF4-208ENST00000469529 WWOXQ9NZC7 414 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 TAAR2Q9P1P5 351 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 SPASTQ9UBP0 616 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 FAM8A1Q9UBU6 413 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 TRAF6Q9Y4K3 522 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 FAM186AA6NE01 2351 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 RIF1Q5UIP0 2472 aaKnown RBP12.37□□□□□ -0.43
TRAF4-208ENST00000469529 SERTM1A2A2V5 107 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 LRRC14BA6NHZ5 514 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 PDZK1P1A8MUH7 402 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 LMO7DNF2Z398 122 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 WFS1O76024 890 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 ENO1P06733 434 aaKnown RBP12.37□□□□□ -0.43
TRAF4-208ENST00000469529 EBLN1P0CF75 366 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 CTSEP14091 401 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 NPPBP16860 134 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 ITPKAP23677 461 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 AK4P27144 223 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-208ENST00000469529 HSPA7P48741 367 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 CSNK1EP49674 416 aaKnown RBP12.37□□□□□ -0.43
TRAF4-208ENST00000469529 PNLIPRP1P54315 467 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 C21orf59P57076 290 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 TBCCQ15814 346 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 GGTA1PQ4G0N0 100 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 CAPN13Q6MZZ7 669 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-208ENST00000469529 EFL1Q7Z2Z2 1120 aaKnown RBP12.37□□□□□ -0.43
TRAF4-208ENST00000469529 GOLGA7Q7Z5G4 137 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 AFAP1L2Q8N4X5 818 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 RAB42Q8N4Z0 105 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 OR5AR1Q8NGP9 310 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 CCL4L1Q8NHW4 92 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 TRPC4APQ8TEL6 797 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 ESAMQ96AP7 390 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 MOCOSQ96EN8 888 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 WDR34Q96EX3 536 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 SEC16BQ96JE7 1060 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 NSUN5Q96P11 429 aaKnown RBP12.37□□□□□ -0.43
TRAF4-208ENST00000469529 FERD3LQ96RJ6 166 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 NUSAP1Q9BXS6 441 aaKnown RBP12.37□□□□□ -0.43
TRAF4-208ENST00000469529 MIR1-1HGQ9H1L0 117 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 OSGEPL1Q9H4B0 414 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 EHD1Q9H4M9 534 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 NOL11Q9H8H0 719 aaKnown RBP12.37□□□□□ -0.43
TRAF4-208ENST00000469529 IPPKQ9H8X2 491 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 PNPOQ9NVS9 261 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 SCHIP1Q9P0W5 487 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-208ENST00000469529 ZNF624Q9P2J8 865 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-208ENST00000469529 ZNF225Q9UK10 706 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 PSMD13Q9UNM6 376 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 APOBEC2Q9Y235 224 aaKnown RBP12.37□□□□□ -0.43
TRAF4-208ENST00000469529 ARL2BPQ9Y2Y0 163 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 ASB1Q9Y576 335 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 USH1CQ9Y6N9 552 aa12.37□□□□□ -0.43
TRAF4-208ENST00000469529 DOCK9Q9BZ29 2069 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 TRPC5OSA6NMA1 111 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 PPP6CO00743 305 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 OR7A17O14581 309 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 AZIN1O14977 448 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 UROSP10746 265 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 EPORP19235 508 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 SLC19A1P41440 591 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 GDF5P43026 501 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 BDKRB1P46663 353 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 DHPSP49366 369 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-208ENST00000469529 RAB28P51157 221 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 INHBCP55103 352 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 UBE2IP63279 158 aaKnown RBP12.36□□□□□ -0.43
TRAF4-208ENST00000469529 TRAF3Q13114 568 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 NAE1Q13564 534 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 C18orf21Q32NC0 220 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-208ENST00000469529 C10orf62Q5T681 223 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-208ENST00000469529 METTL21CQ5VZV1 264 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 LIPJQ5W064 366 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 KANK2Q63ZY3 851 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 EPGNQ6UW88 154 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 LCTLQ6UWM7 567 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 TAF8Q7Z7C8 310 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 THOC6Q86W42 341 aaKnown RBP12.36□□□□□ -0.43
TRAF4-208ENST00000469529 GKN2Q86XP6 184 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 SFRP1Q8N474 314 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 TEX9Q8N6V9 391 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 SUMF1Q8NBK3 374 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 CCDC197Q8NCU1 140 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 OR2L8Q8NGY9 312 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 C10orf82Q8WW14 230 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 SMPDL3AQ92484 453 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 MAELQ96JY0 434 aaKnown RBP12.36□□□□□ -0.43
TRAF4-208ENST00000469529 LRRC61Q9BV99 259 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms