RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 C8orf44Q96CB5 159 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 FICDQ9BVA6 458 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 CUTCQ9NTM9 273 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 ZDHHC3Q9NYG2 299 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 CHMP5Q9NZZ3 219 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 PTGFRNQ9P2B2 879 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 KLHL8Q9P2G9 620 aaPredicted RBP16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 NXT1Q9UKK6 140 aaKnown RBP16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 TRBV5-4A0A0C4DH59 114 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 KRT1P04264 644 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 PRR35P0CG20 571 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 ADRA1AP35348 466 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 TNNT3P45378 269 aaPredicted RBP16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 NR2C2P49116 596 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 FANCCQ00597 558 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 C3AR1Q16581 482 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 TAZQ16635 292 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 FILIP1LQ4L180 1135 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 ATG9BQ674R7 924 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 RANBP10Q6VN20 620 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 PID1Q7Z2X4 250 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 KBTBD2Q8IY47 623 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 LMNTD1Q8N9Z9 388 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 CPLX3Q8WVH0 158 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 MTFMTQ96DP5 389 aaKnown RBP16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 ZNF285Q96NJ3 590 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 APOL2Q9BQE5 337 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 FSD1LQ9BXM9 530 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 TINAGQ9UJW2 476 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 ASF1AQ9Y294 204 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 ABCA2Q9BZC7 2435 aa16.44■□□□□ 0.22
UBE2D4-209ENST00000454428 DYTNA2CJ06 578 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 C5orf60A6NFR6 353 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 ISM1B1AKI9 464 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 CFAP99D6REC4 459 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 SLC19A2O60779 497 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 CELA2AP08217 269 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 H2AFZP0C0S5 128 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 PIM1P11309 404 aaPredicted RBP16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 COX6A1P12074 109 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 ACPPP15309 386 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 KLC1Q07866 573 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 H2AFVQ71UI9 128 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 TBC1D21Q8IYX1 336 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 SIRT6Q8N6T7 355 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 LINC01555Q8NAE3 123 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 OR5K2Q8NHB8 316 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 HEXDCQ8WVB3 486 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 CRB3Q9BUF7 120 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 MENTQ9BUN1 341 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 MCCC2Q9HCC0 563 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 LCMT1Q9UIC8 334 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 TDRKHQ9Y2W6 561 aaKnown RBP16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 PRSS21Q9Y6M0 314 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 MAU2Q9Y6X3 613 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 FBN3Q75N90 2809 aa16.43■□□□□ 0.22
UBE2D4-209ENST00000454428 FITM1A5D6W6 292 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 BHMG1C9JSJ3 638 aaPredicted RBP16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 USP1O94782 785 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 WDPCPO95876 746 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 ITGALP20701 1170 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 ACRV1P26436 265 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 GRIA3P42263 894 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 CDKN2BP42772 138 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 PMP22Q01453 160 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 TLE4Q04727 773 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 KIR2DS3Q14952 304 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 NAPRTQ6XQN6 538 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 SERPINA9Q86WD7 417 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 DNAJB8Q8NHS0 232 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 STT3BQ8TCJ2 826 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 SPOCK3Q9BQ16 436 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 VPS37BQ9H9H4 285 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 POLG2Q9UHN1 485 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 RSPH14Q9UHP6 348 aa16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 MRPS2Q9Y399 296 aaKnown RBP16.42■□□□□ 0.22
UBE2D4-209ENST00000454428 A0A1W2PQ72 361 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 MAP2K7O14733 419 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 CST8O60676 142 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 RASAL1O95294 804 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 CLDN14O95500 239 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 AP2A1O95782 977 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 CRYABP02511 175 aaKnown RBP16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 PKLRP30613 574 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 MC4RP32245 332 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 TYRO3Q06418 890 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 GPR33Q49SQ1 333 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 LRRC38Q5VT99 294 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 YOD1Q5VVQ6 348 aaPredicted RBP16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 DENND5AQ6IQ26 1287 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 NCCRP1Q6ZVX7 275 aaPredicted RBP16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 NDUFAF7Q7L592 441 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 NLRP9Q7RTR0 991 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 LAPTM4BQ86VI4 370 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 PIANPQ8IYJ0 282 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 PRSS58Q8IYP2 241 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 CCDC110Q8TBZ0 833 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 DENND1AQ8TEH3 1009 aa16.41■□□□□ 0.22
UBE2D4-209ENST00000454428 CTNNBL1Q8WYA6 563 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms